| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0440 |
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| Symbol | |
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| ID | 4309803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 491971 |
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| End bp | 492726 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638148228 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_772333 |
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| Protein GI | 115350494 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.122838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGATT CCTCGCTGGC GGGCCGGGCA CCGGCCGAAG CCGACGGCCC GATCCGTTTC
GCGGCGCCGC GCATCGACGC GGCGCTGATC GACCTCGACG GCACGATGGT CGATACGGCC
GACGATTTCA CGGCCGGGCT GAACGGCATG CTCGCGCAGC TCGGCGCGCC GGCCACGTCG
CGCGACGAGG TGATCGGTTA CGTCGGCAAG GGCTCCGAGC ATCTGATCCA GAGCGTGCTG
AAGCCGCGCT TCACGCCCGA CCAAGCGCAC GCGCGCTTCG ACGACGCGCT CGCGATCTAT
CAGACCGAAT ACGCAAAGAT CAACGGCCGT CACACGCGCC TCTATCCCGA GGTCGCGGCC
GGCCTCGACG CGTTGCGCGC GGCCGGCATC CGGCTCGCGT GCGTGACGAA CAAGCCGCAC
CGCTTCGCGG TCGAGCTGCT CGAGCAATAC GGGTTGATCG ATCGCTTCGG CATCGTGCTC
GGCGGCGACA GCGTCGCGCG CAAGAAGCCT GATCCCCTGC CGATGCTGGC GGCCTGCGAC
GCGCTCGGCG TCGCGCCGGA CGCGGCGGTC GCGATCGGCG ACTCGGAAAA CGACGCGCTG
GCGGGCCGTG CGGCCGGCAT GGCGACGCTG ACGGTGCCGT ACGGGTACAA CCACGGCAAA
GCTATACAAA CGATAAATTC GGATGGTATA GTCGATTCGT TGCTGGTCGC AGCACGCGCG
ATCACCGCGC ACAACGCCGG CCGGCCAACC ATCTGA
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| Protein sequence | MADSSLAGRA PAEADGPIRF AAPRIDAALI DLDGTMVDTA DDFTAGLNGM LAQLGAPATS
RDEVIGYVGK GSEHLIQSVL KPRFTPDQAH ARFDDALAIY QTEYAKINGR HTRLYPEVAA
GLDALRAAGI RLACVTNKPH RFAVELLEQY GLIDRFGIVL GGDSVARKKP DPLPMLAACD
ALGVAPDAAV AIGDSENDAL AGRAAGMATL TVPYGYNHGK AIQTINSDGI VDSLLVAARA
ITAHNAGRPT I
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