| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0720 |
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| Symbol | |
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| ID | 5057161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 804415 |
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| End bp | 805293 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640472987 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001157575 |
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| Protein GI | 145593278 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.070073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGGA TCCAGGCGGT GCTCTTCGAC TTCTTCGGCA CGCTGACCCG CGCCGTACAG
CGTGGTAGCG CCCACCGCAC GATGGCCGAG CTGCTCGGCT GCCCGCCCGA GGTATTCGTC
AAGGTCCTCG ACCGCACCTA CTATCAGCGC GCCACCGGCG CCCTGGGCAC CGCCGAGGCG
ACCCTGCGCT GGGTATGTGA GCAGGCCGGG GTTCGACCCT CCACCGCGGC GCTCCGGTCG
GCGGTGATCG CCCGATTCCG CGCCATCCGC GCTGACACCC GCCTTCGCAC CGAGGCAGTA
CCCACCCTCG CCGCGCTGCG CCAGCGCGGG CTCCGAATCG GGTTGGTCAG TGACTGCACC
CATGAACTGC CCGCCTTCCT GCCGCAGTTG CCGATCGATC CGCTCCTCGA TGTCCGAGTC
CTCTCGGTCC AGTTCGGGCG CTGCAAGCCC GACCCGGAGC TGTACCGGGC CGCCTGCCGG
CAGCTGGGCC TGACGCCCGC CGCCTGCCTG TACGTGGGGG ACGGGGGGAG TCAGGAACTG
ACCGGGGCGG AGCGGGCCGG GCTGCACGCG GTACGCCTGG CGGCCCCGGA CCTCGCCGGC
CATCTGACCT TCAACCCGGA CGCCGGCTGG ACCGGACCGG AGCTGACCTC CCTGGCCGGG
GTGGTTGACG TGATCGACCG GGCCGATGCC GGGCCGCCGC GGATGACCGA CCCCGATCCG
CACCACCAGC CGGCTGAGGT CAGCGCCGTC GGACGCGGTG CAGCCGGAAC GGCTTACGGG
CTGCCCGAAC CACCGCCGCC GGGCGAGGCG GCTGGGCCAG CGACGTGGTG GGGAGTGCCG
AGCCGGCCAG CGGATCGCCG GCGGGAACGA GGCGGTTGA
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| Protein sequence | MPRIQAVLFD FFGTLTRAVQ RGSAHRTMAE LLGCPPEVFV KVLDRTYYQR ATGALGTAEA
TLRWVCEQAG VRPSTAALRS AVIARFRAIR ADTRLRTEAV PTLAALRQRG LRIGLVSDCT
HELPAFLPQL PIDPLLDVRV LSVQFGRCKP DPELYRAACR QLGLTPAACL YVGDGGSQEL
TGAERAGLHA VRLAAPDLAG HLTFNPDAGW TGPELTSLAG VVDVIDRADA GPPRMTDPDP
HHQPAEVSAV GRGAAGTAYG LPEPPPPGEA AGPATWWGVP SRPADRRRER GG
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