Gene Saro_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0570 
Symbol 
ID3918052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp616832 
End bp617476 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID640443300 
Productepoxide hydrolase domain-containing phosphatase 
Protein accessionYP_495851 
Protein GI87198594 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02247] Epoxide hydrolase N-terminal domain-like phosphatase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.457347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTACG CAGCGGTGAT CTTCGACTTC GGCGGCGTGA TCACGTCCTC GCCCTTCGAG 
GCTTTCAACC GGCTCGAGGC CGAGCGCGGC CTTCCCCGCG ATCTCGTCCG GCGGATCAAT
GCCCTGAACC CGGACACGAA CGCATGGGCC CTGTTCGAAC GAGCCGAGAT CGGCGCGGCG
GAATTCGACC GGCTGTTCTC GGAAGAGGCG CGCGCGCTGG GGCACGAGCT GGACGGCGCT
TCGGTGCTGG CGGTTCTCGC CGGCGCGGTG CGCCCGGCAA TGGTTTCCGC GCTCGACCGC
CTGGCGGCCG AAGGCTACCG CCTGGGCTGC ATCACCAACA ACGTGCCCGC CGGACACGGC
GCTGGCATGG CCCGGAGCGC CGACGCGCAC GACGAACTGG AACAGATCTT CGCCCGGTTC
GAGCATGTGA TCGAAAGCAG CAAGGCCGGG GTCAGGAAGC CCGATCCGCG CATTTACCTG
ATGATGTGCG ACGCGCTTGG CCTGGAGCCG CGCCAGTGCG TCTATCTCGA CGACCTTGGC
ATCAACTGCA AGCCGGCCGC CGGTCTGGGG ATGCATGCGA TCAAGGTGAC CGGCGGGGAT
CAGGCGCTGG CCGATCTTGG CGCAGTGCTC GGGCTGGCTT TCTGA
 
Protein sequence
MTYAAVIFDF GGVITSSPFE AFNRLEAERG LPRDLVRRIN ALNPDTNAWA LFERAEIGAA 
EFDRLFSEEA RALGHELDGA SVLAVLAGAV RPAMVSALDR LAAEGYRLGC ITNNVPAGHG
AGMARSADAH DELEQIFARF EHVIESSKAG VRKPDPRIYL MMCDALGLEP RQCVYLDDLG
INCKPAAGLG MHAIKVTGGD QALADLGAVL GLAF