| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0542 |
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| Symbol | |
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| ID | 6120949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 592512 |
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| End bp | 593189 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641648612 |
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| Product | hydrolase |
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| Protein accession | YP_001775178 |
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| Protein GI | 170729745 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.491879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGAGTG CTCCGTTGTC ATTCATGCCC GAGGCGGTGA TCTTCGACAT GGATGGTCTG
ATGCTTGATA GCGAGCGCGT GAGCATCGAA TGTCGGTGTC GCGCTGCGTT TGATCTTGAG
CAGCAAATTG AGCCGGATTA CTGGTTACAG ATGGTCGGGG TGAGCGATAT CGCTTGTCAC
GCGCAGCTGA GCGCACGCAT TGGTGCTGTA TCAGCGACAG CGTTGTTGGC CCGCAGCGAT
GCGTTATATG AGGCGGTGGT TATGAAGGGG GTGCCGCATC GGCCAGGAAT CGTTACGTTA
CTGGAGTGGC TGTTCGCGCG TGGTATTCCG TGTGCGGTTG GTACGTCTAC GCGGCGTCCG
TTGGCGCTGC GTAAATTGAA TACGGCAGGC TTGTTGTCGC GTTTCGATGT GGTGTGTACT
GCGAGTGAAG TTGCGCAAGC TAAGCCAGCG CCAGATATTT ATTTATTGGC TGCGCACACG
CTTGGTATCG TTCCGGGGCG CTGCTTGGTG GTGGAGGATT CACCGATTGG GGTACGTGCC
GCATTGGCTG CAGGTATGAC ACCAATTCAG GTGCCGGATT TGCTGATGCC GGATGCTCAG
GTAAGCGCGC TGGGGCACCG GATTGTGGCT TCATTGACAG AGGTGCAGAG CCTGTTGGAA
GCGTGTTTTG ATGTCTGA
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| Protein sequence | MVSAPLSFMP EAVIFDMDGL MLDSERVSIE CRCRAAFDLE QQIEPDYWLQ MVGVSDIACH
AQLSARIGAV SATALLARSD ALYEAVVMKG VPHRPGIVTL LEWLFARGIP CAVGTSTRRP
LALRKLNTAG LLSRFDVVCT ASEVAQAKPA PDIYLLAAHT LGIVPGRCLV VEDSPIGVRA
ALAAGMTPIQ VPDLLMPDAQ VSALGHRIVA SLTEVQSLLE ACFDV
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