| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0265 |
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| Symbol | |
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| ID | 3761435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 313346 |
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| End bp | 314029 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637784970 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_390535 |
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| Protein GI | 78484610 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAAG AAAAAATAAA ACCGGGATTC ATCTTAATTG ATTTGGATGG AACCTTGATT
GACAGCGTGC CAGATTTGGC GTATTGCGTT GATGAAATGA TGAAACAGCT TGGTATGCCT
GTTCGTGGTG AAGCCGCGGT ACGTAACTGG GTTGGAAATG GCGTTCAGCG TCTTGTTGAA
AGAGCGTTGA TTAACTCTGT CGATGGCATG CCGGATCAAG ACTTGATGGA TAAGGCCTAT
CCTATTTATC TTGAGCTTTA TAAAGAAAAT ACTTCTAAGC GCAGCTGTGT GTATGAAGGG
GTTGTTGAAG GAATTGAATG GATGAAAGCA CAAGGCTATC GTGTGGCATG TGTCACCAAC
AAAGCCGCAG CCTTTACCAT TCCGCTTTTG AAAGATAAAG GGCTTTACGA TTCTTTTGAA
GTGATTGTTT CTGGTGATAC TTGTGAAGAG AAAAAGCCGC ATCCAATGCC ATTACTTTAT
GCGGCAGAAC AGTTGGGCGT AACACCGGAA AATGCTTTGA TGATCGGTGA TTCGAAATCC
GATGTGAAAG CAGCCCGTGC TGCTGGCTTT CATATTTTCT GCATGACTTA TGGGTATAAT
CATGGTGAAG ATATTCGAAA CTATGAGCCT GATGCGGTTA TGGGTTCCTT TATGGAATTG
CCAAATTACT TAGCGGCTAA ATAA
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| Protein sequence | MSQEKIKPGF ILIDLDGTLI DSVPDLAYCV DEMMKQLGMP VRGEAAVRNW VGNGVQRLVE
RALINSVDGM PDQDLMDKAY PIYLELYKEN TSKRSCVYEG VVEGIEWMKA QGYRVACVTN
KAAAFTIPLL KDKGLYDSFE VIVSGDTCEE KKPHPMPLLY AAEQLGVTPE NALMIGDSKS
DVKAARAAGF HIFCMTYGYN HGEDIRNYEP DAVMGSFMEL PNYLAAK
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