| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0464 |
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| Symbol | |
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| ID | 6177758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 521039 |
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| End bp | 521794 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641680206 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001807177 |
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| Protein GI | 172059525 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.992467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGATT CCCCGCTGGC GGGCCGGGCA CCGGCCGAAG CCGACGGCCC GATCCGTTTC
GCGGCGCCGC GCATCGACGC GGCGCTGATC GACCTCGACG GCACGATGGT CGATACGGCC
GACGATTTCA CGGCCGGGCT GAACGGAATG CTCGCGCAGC TCGGCGCGCC AGCCACGTCG
CGCGACGAGG TGATCGGCTA CGTCGGCAAG GGCTCCGAGC ATCTGATCCA GAGCGTGCTG
AAGGCGCGCT TCACGCCCGA CGAAGCGCAC GCGCGCTTCG ACGACGCGCT CACGATCTAC
CAGACCGAAT ACGCAAAGAT CAACGGCCGT CACACGCGCC TCTATCCCGA GGTCGCGGCC
GGTCTCGAGG CATTGCGCGC GGCCGGCATC CGGCTCGCGT GCGTGACGAA CAAGCCGCAC
CGCTTCGCGG TCGAGCTGCT CGAGCAATAC GGGCTGATCG ATCGCTTCGG CATCGTGCTC
GGCGGCGACA GCGTCGCGCG CAAGAAGCCC GATCCCCTGC CGATGCTGGC GGCGTGCGAC
GCGCTCGGCG TCGCGCCGGA CGCGGCGGTC GCGATCGGCG ACTCGGAAAA CGACGCGCTG
GCGGGCCGTG CGGCCGGCAT GGCGACGCTG ACGGTGCCGT ACGGGTACAA CCACGGCAAG
GCTATACAAA CGATAAATTC GGATGGTATA GTCGATTCGT TGCTGGTCGC AGCACGCGCG
ATCACCGCGC ACAACGCCGG CCGGCCAACC ATCTGA
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| Protein sequence | MADSPLAGRA PAEADGPIRF AAPRIDAALI DLDGTMVDTA DDFTAGLNGM LAQLGAPATS
RDEVIGYVGK GSEHLIQSVL KARFTPDEAH ARFDDALTIY QTEYAKINGR HTRLYPEVAA
GLEALRAAGI RLACVTNKPH RFAVELLEQY GLIDRFGIVL GGDSVARKKP DPLPMLAACD
ALGVAPDAAV AIGDSENDAL AGRAAGMATL TVPYGYNHGK AIQTINSDGI VDSLLVAARA
ITAHNAGRPT I
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