| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1667 |
|---|
| Symbol | |
|---|
| ID | 4057124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | + |
|---|
| Start bp | 1773028 |
|---|
| End bp | 1773627 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641230690 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_605131 |
|---|
| Protein GI | 94985767 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0663843 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTC GCGCGGTGTT CTGGGATATC GGCGGGGTGC TGCTCACCAA CGGCTGGGAC
CGCGAGCAGC GGGCGGAGGT GGTGACCCGC TTTGGGTTGA ATGCCGAAGA CTTCGCCGAG
CGGCACAAGC TGGCGGTGCC AGAACTGGAA CGGGGCCGCA TGAGCCTCGC TGCGTACCTG
GACCAAACGG TCTTCTACAC CGGGCGCCCC TTCACGTCCG AGGACTTCCG CGCCGCGATG
GAGGCCGCGA GCCAGCCCCA GGCGGCGACG CTGGCCTTTG CGCGCGATCT GGGCCAGCGC
TGGCGCATGT ACTCGCTCAA CAACGAGGGC CGCGACCTCA ACGAGTACCG CATCCGCACC
TACGGCCTGG ACGAGTTCCT GCTGGCCTTT TTCACGTCCT GCTACCTGGG CCTGCTCAAA
CCCAACCCGG CGATGTACCG CCTCGCCCTC GATCTCGCCC ACGTGCGCCC CGAGGAGGCC
GTGATGGTGG ACGACCGTCT CCAAAACGCT GAAGCCGCAC GCTCGGTGGG GATGCACGCG
GTCCACTATC AGCATGCCGA GCAGCTGCGG GCCGAACTGG CCGCGCTGGG GGTGGCGTAG
|
|---|
| Protein sequence | MTIRAVFWDI GGVLLTNGWD REQRAEVVTR FGLNAEDFAE RHKLAVPELE RGRMSLAAYL
DQTVFYTGRP FTSEDFRAAM EAASQPQAAT LAFARDLGQR WRMYSLNNEG RDLNEYRIRT
YGLDEFLLAF FTSCYLGLLK PNPAMYRLAL DLAHVRPEEA VMVDDRLQNA EAARSVGMHA
VHYQHAEQLR AELAALGVA
|
|---|
| |