| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2805 |
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| Symbol | |
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| ID | 3910598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3196514 |
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| End bp | 3197140 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637884705 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_486418 |
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| Protein GI | 86749922 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.187459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCA CTCTCACGCC CGGCGCGGCC GACGCGCTGT TGTTCGATCT CGGCCGCGTC
GTGATCGACT TCGATCTCGC CCGCACGCTG AAAGCCTGGG CGGTCGAACT CGGCAGCGAT
CCGTCCGCGA TGATGACGGC GCTGGCCCGC AACGACACCT TCCATCGCTA TGAGACCGGT
CACGTCACCG ACGCGGAGTT CTTCGCCGCG GTGCGCGAGG CGCTGCGGCT CGAACTGTCC
GACGATCAGT TGCGCGAGGG CTGGAACGCG ATCTTCATCG GCGAGATGCC GGGCATCGCG
CCGCTGCTCG AACGCGCCGC GCGGCATCTG CCGCTGTATG CGCTGTCCAA CACCAATGAC
GCCCACATCG CGCATTTCTC GGAGCATTTC GCCGAGCTGC TGAAACCGTT CCGCGAACTG
TTCCTGTCGT CGCGGATCGG CATGCGCAAA CCCAATGCGG CAGCCTATGA TCATGTCGTC
AGGGCGATCG GCGTGCGGCC CGAGCGCATT GTGTTCTTCG ACGATCTGGC GGAAAACATC
GCGGCCGCGC GCGTGCGCGG GCTCCAGGCC GTGCATGTCC GCTCCAGCGC GGACGTGGCG
CAGGCGCTGG ATCAACTCGG GCTGTGA
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| Protein sequence | MTTTLTPGAA DALLFDLGRV VIDFDLARTL KAWAVELGSD PSAMMTALAR NDTFHRYETG
HVTDAEFFAA VREALRLELS DDQLREGWNA IFIGEMPGIA PLLERAARHL PLYALSNTND
AHIAHFSEHF AELLKPFREL FLSSRIGMRK PNAAAYDHVV RAIGVRPERI VFFDDLAENI
AAARVRGLQA VHVRSSADVA QALDQLGL
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