| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5250 |
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| Symbol | |
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| ID | 8336604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6045950 |
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| End bp | 6046633 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644958348 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003115950 |
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| Protein GI | 256394386 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.922708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACTTCCA CTCCCCTAGC GCTTCTGCTC GACTCCGGCG GCGTCCTGAT GCGGCCCATC
GGCGGCCGGT GGAACCCGCG TGCCGATTTC GAGGCGACGG TGAAGGACCA CGCCGCGCAG
GTGACCGATG AGCAACTGGC CGAGGCGGTG CGCGAGGGCG ACCGCTTCAT GGCCGCGGTG
ACTTCGACGC CGGATCTGGA CGACTACCAT CGCGCGATGC TGCACCACAT CGGCGTCGAG
GCGTCGGCGG AGTTGTTGGC GGCACTGGTG AAAGACGTCC CGCCGACCGC GGTTCTGGAG
ACGTTCCCGG AAGTCGTCGC GACGTTGACG ACGTTGCGCG CCCGGGGCGT CCCGATGGCG
GTGGTGTCCG ACGCCTGGCC GAACCTGCCT GATCTGCATG CGGCCCTGGG AATGGGCGAC
TTCTTCGACG CCTACGCGAT CTCCGCCGTC CTGGGCTGCC ACAAGCCGGA CCCGAGGATG
TACCACCACG CCAGCGAGGC GCTCGGGCTC GCCCCGGCCG ACTGCCTGTT CGTGGACGAC
GCTCCGGAGT TGGTCGCTGC CGCTATCGCG CTGGGATATC AGGGGTGCGC GATGGTGCGG
GATGAGGGCG ATGGCTCGGC GGAAGCTGAA GCGCTCGGCG TGGCGGTCAT CAGTTCCCTG
ACTGAGGTGC TGGGGCTGGT CTGA
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| Protein sequence | MTSTPLALLL DSGGVLMRPI GGRWNPRADF EATVKDHAAQ VTDEQLAEAV REGDRFMAAV
TSTPDLDDYH RAMLHHIGVE ASAELLAALV KDVPPTAVLE TFPEVVATLT TLRARGVPMA
VVSDAWPNLP DLHAALGMGD FFDAYAISAV LGCHKPDPRM YHHASEALGL APADCLFVDD
APELVAAAIA LGYQGCAMVR DEGDGSAEAE ALGVAVISSL TEVLGLV
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