| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2117 |
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| Symbol | |
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| ID | 3581651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 2477936 |
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| End bp | 2478568 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637685820 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_290173 |
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| Protein GI | 72162516 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCTCTC GCCCACTCCA GGACTCCCCC TCCCCCATCA CCACGGTGGT CTTCGACTAC
GGCGAAGTCC TCTCGGTGCC GCCGCCTGAG TCCCGTTCCC GGTTGGTAGC GCTGAGCGGC
GTGCCCGCCG AACAGTTCTG GGACGCCTAC TGGCATGAGC GGCGCGCCTA CGATGCCGGA
CTCGACTCTC GGGAGTACTG GGACCGGGTT GGCGCCCGGC TCAACATCTC GTGGGATCCC
GCGGTCCGGC AGGAGCTGTG GGCCACCGAC ATGGGCGGCT GGCTGGTGCC CGAACCTGAG
GCCGCTGCAC TGGCCGCTCG GCTCACCGCC AGTCCGCTCC GGGTGGCGTT ACTGTCCAAC
GCCCCGCACG ACCTCGCCGC TCCGCTGCGT TTCTCCCCGC TGCTGTGCGG CTTTGACGCG
CTGTTTTTCA GTTGTGAGAT CGGATTATGC AAACCCGATT CCCGGGTGTA TGAACATGTG
CTGCGCGAGC TTGGCGCCGA CCCGCACGAG ACCCTCTTCA TTGACGACCG GGAGGCGAAT
ATCCGTGCCG CCGCGGCATT GGGGATCCGT GTGCACCACT ACACCGGGGC TGCCGGGCTT
GCCGCACTCC TCCAGCAGCT CTCACTGGGG TGA
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| Protein sequence | MTSRPLQDSP SPITTVVFDY GEVLSVPPPE SRSRLVALSG VPAEQFWDAY WHERRAYDAG
LDSREYWDRV GARLNISWDP AVRQELWATD MGGWLVPEPE AAALAARLTA SPLRVALLSN
APHDLAAPLR FSPLLCGFDA LFFSCEIGLC KPDSRVYEHV LRELGADPHE TLFIDDREAN
IRAAAALGIR VHHYTGAAGL AALLQQLSLG
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