| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3517 |
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| Symbol | |
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| ID | 6283463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3962112 |
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| End bp | 3962735 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642623096 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_001897131 |
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| Protein GI | 187925489 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00913759 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.088603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCATCA AGGCAGTGGT GTTCGATTTC GGCGGCGTGC TGATCGACTG GAGTCCGGAG
TATCTCTATC GGGAACTGAT TCCTGACGAA ACCGAGCGCC GCTGGTTTCT GACCCACGTC
TGCTCGATGG ACTGGGTGAT CCGTCAGGAT GGCGGCCAGC CGATTGTCGA GGCCACCGCG
GAACTGGTCG CCAGGTTTCC CGATCACGAA GCGCTGATCC GCGCATTCTA CGAACGCTGG
CACGAGATGG TGGCCGGCGT GCTGGAAGAA GGCGTGGCAA TCATGGAAAA GCTCGAAGCG
GCCGAGGTGC CGCTTTTCGG GCTGACCAAC TGGTCGGCGG AGACCTTTCC CTATGCGTGG
GAGCATTACC CGGTGCTGCG GCGCTTTCGC GACATCGTCG TGTCGGGGCG AGTGAAGTTG
GTGAAGCCCG ATCCGGCCAT TTTCGCGGCC ATGCGCGAGC GGATCGAGGC GCAATTGCCG
GGCATCGAGC CCGCCGAACT TGTCTTTATC GACGACAACC TGAAGAACGC CGAAGCCGCG
ACGGCGCTCG GCTGGCATGG CGTGCATCAC ACCAGCGCCG CGCGAACCGA AGCAAAACTG
CGCGAGCTCG GGTTGCCGGT TTAA
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| Protein sequence | MAIKAVVFDF GGVLIDWSPE YLYRELIPDE TERRWFLTHV CSMDWVIRQD GGQPIVEATA
ELVARFPDHE ALIRAFYERW HEMVAGVLEE GVAIMEKLEA AEVPLFGLTN WSAETFPYAW
EHYPVLRRFR DIVVSGRVKL VKPDPAIFAA MRERIEAQLP GIEPAELVFI DDNLKNAEAA
TALGWHGVHH TSAARTEAKL RELGLPV
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