| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5336 |
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| Symbol | |
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| ID | 6279514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1517594 |
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| End bp | 1518208 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616422 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_001889065 |
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| Protein GI | 187920034 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCAT CCATCACGCT GGTTCTGTTC GACATGGAAG GTGTTTTGTC CCACTACGAC
CGCGCCGCGC GAGTCGATCA TCTGGCGGCA ACCGCCGGTT GCACAGCGGA CACGGTGCGT
CACGCGATCT GGGGTTCGGG GCTCGAAGCG CGCGCCGACG CCGGGGAAAT CAGCGATGAC
GAGTATCTGC GCGAGTTAGG CATGCTGCTG AACCACCCCA TCAGCCGCGA CGAATGGCTG
GCCGCCCGTC ACGCGTCGAT TACGCCGAAC CAGGACGCGC TCGCGCTTGC CGCCCAGGTC
GCCGAGCGGC ACCGCATTGC GGTGCTGACC AATAATTGCC GCCTGTTGAT CGATCACATC
GCTTATCTGA ATCCGCCTGT CGCGCGGCTG TTCGGGCCGC ACGTTTACTC GTCGGCGGCT
TTTGGCGCCG CTAAGCCGGC GGCGCAAACC TATCTGCGTT GTCTGGAGCA GATCGGCGTG
CCCGCGGCCC AAACGCTTTT CGTCGACGAC ACGGCCGCCA ACGTGAACGG CGCGATCGAT
GCAGGACTGC AAGGACACAT GTTCGTCAGC GTCGGCTCAT TGTCGGAAGA CTTGCAGCGT
CGCGGTTTGA TATAG
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| Protein sequence | MTASITLVLF DMEGVLSHYD RAARVDHLAA TAGCTADTVR HAIWGSGLEA RADAGEISDD
EYLRELGMLL NHPISRDEWL AARHASITPN QDALALAAQV AERHRIAVLT NNCRLLIDHI
AYLNPPVARL FGPHVYSSAA FGAAKPAAQT YLRCLEQIGV PAAQTLFVDD TAANVNGAID
AGLQGHMFVS VGSLSEDLQR RGLI
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