Gene GSU0572 details

Gene Information

• Locus tag: GSU0572
• ID: 2685640
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 600586
• End bp: 601209
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637125238
• Product: HAD family hydrolase
• Protein accession: NP_951630
• Protein GI: 39995679
• COG category: [R] General function prediction only
• COG ID: [COG1011] Predicted hydrolase (HAD superfamily)
• TIGRFAM ID: [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.112395
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGGCTGG GGGCACCGGC GGAGAAGGTT ACGACGGTTA TTTTCGACTA TGGCGGGGTG 
CTGGCCGAGG AGGGATTCCG GGAGGGGCTG TTCGAGCTTG CCCGGCGCCA GGGGCTCGAC 
CCCGTTGCGG TGCACGGTGC CGGCATGGAG GCGGTCTACG CCAGCGGCTA CGTGCTGGGT 
AAGGGAAGCC AGTCGGCATT CTGGCAGTCG CTGCGGGAGC GGACCGGTCT GCGGGGGAGC 
GACCGGGAGC TGTCGAACCT GATCCTCGAC CGCTTCGTGC TCCGGCCCCG GATGATGGAG 
GCCGTCCGCG CCCTGAGGGC GCAGGGGTAC CGGACCGTCA TCCTCAGCGA CCAGACCGAC 
TGGCTCGAGT GGCTCGACCG GCGCGACGGC TTTTTCCGGG AGTTCGAACG GGTCTTCAAC 
AGCTACCGGC TGGGCAAGGG GAAGCGGGAC CCTTCGGTGT TCGACGACGT GGCGCGGGAG 
CTGGGCATCG CCCCCGGCGA GGCGCTCTTT GTGGACGACA TGCTCGCCAA CGTGGTGCGG 
GCCGAAAGCC GGGGGATGCG GGGCATCCTG TTCGAGGACG AGCCACGGTT CGAGCGGGAC 
CTGAAACGGT ACACGGAGGT GTAG 

 

Protein sequence

MRLGAPAEKV TTVIFDYGGV LAEEGFREGL FELARRQGLD PVAVHGAGME AVYASGYVLG 
KGSQSAFWQS LRERTGLRGS DRELSNLILD RFVLRPRMME AVRALRAQGY RTVILSDQTD 
WLEWLDRRDG FFREFERVFN SYRLGKGKRD PSVFDDVARE LGIAPGEALF VDDMLANVVR 
AESRGMRGIL FEDEPRFERD LKRYTEV