Gene Haur_2677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2677 
Symbol 
ID5734542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3432641 
End bp3433309 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content53% 
IMG OID641279819 
ProductHAD family hydrolase 
Protein accessionYP_001545443 
Protein GI159899196 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGAC CTGTATTTAT CGATTTGTAC TTTACCTTGA TTGAGCCAGA CCCCGCTTAC 
AACTGGGCAA CCTTGGCAGC CCCGCTGCTC GGCATCGAGC AGCATGCCTT TCATGCTGCG
GCTGGTCGTT CGTATCAAGC GCGGATGGTT GGCACCTATC GTTTGGCTGA AGAGATTGTT
GATCAAACCT TGGGCTATTT GGGGATGAGC GTTACACCTG AGGTGCATGC CACGCTGACC
AAACAGCGCT TGGAGTTTTT CAGCACGCTT CGCGTTTATC CCGATTCGAT ACCGACCTTG
CAAGCCTTGC GAGCACGTGG CCACCAAATT GCCTTGGTCA CCAACTGCTC AGCCGAAACC
ATCCCGATGA TGGAGCCGCT GGGTTTGCTA AATTTGTTTG ATGCACTTGC CTACTCCTGC
GATGTGCGTT CGGCCAAGCC TGAGCCTGGC ATTTATCAGC ATGCCCTCGA TGTCTTGAAT
GTTGACCCGC GTGAGGTGGT GTATGTTGGT GATGGCGATA CCCAAGAGCA TGCTGGCGCA
GCCAAATTTG GCATGACCAC CGTACTGCTC CAGCGGCCTG AAGCTAAAAT ACGCGCTGTG
CAAACCGATT ATGTAATTAA CTCGCTGACT GAATTATTGG ATTTAGCGCC ACTGAGCCAA
GGAGCCTAA
 
Protein sequence
MPRPVFIDLY FTLIEPDPAY NWATLAAPLL GIEQHAFHAA AGRSYQARMV GTYRLAEEIV 
DQTLGYLGMS VTPEVHATLT KQRLEFFSTL RVYPDSIPTL QALRARGHQI ALVTNCSAET
IPMMEPLGLL NLFDALAYSC DVRSAKPEPG IYQHALDVLN VDPREVVYVG DGDTQEHAGA
AKFGMTTVLL QRPEAKIRAV QTDYVINSLT ELLDLAPLSQ GA