More than 300 homologs were found in PanDaTox collection
for query gene Bxe_A0549 on replicon NC_007951
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007951  Bxe_A0549  putative short-chain dehydrogenase/reductase, FabG-like  100 
 
 
266 aa  540  1e-153  Burkholderia xenovorans LB400  Bacteria  normal  0.204322  normal  0.437639 
 
 
-
 
NC_010681  Bphyt_3408  short-chain dehydrogenase/reductase SDR  95.86 
 
 
266 aa  522  1e-147  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0359384  normal  0.0764099 
 
 
-
 
NC_010622  Bphy_2612  short-chain dehydrogenase/reductase SDR  85.71 
 
 
266 aa  464  9.999999999999999e-131  Burkholderia phymatum STM815  Bacteria  normal  normal  0.227086 
 
 
-
 
NC_007510  Bcep18194_A3706  Short-chain dehydrogenase/reductase SDR  79.61 
 
 
268 aa  416  9.999999999999999e-116  Burkholderia sp. 383  Bacteria  normal  0.283086  normal  0.654023 
 
 
-
 
NC_010084  Bmul_2761  short-chain dehydrogenase/reductase SDR  77.78 
 
 
264 aa  417  9.999999999999999e-116  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.386853 
 
 
-
 
NC_008390  Bamb_0525  short-chain dehydrogenase/reductase SDR  76.74 
 
 
271 aa  405  1.0000000000000001e-112  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0549  short-chain dehydrogenase/reductase SDR  76.36 
 
 
270 aa  401  1e-111  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.00753595  normal  0.67708 
 
 
-
 
NC_008060  Bcen_0141  short-chain dehydrogenase/reductase SDR  77.07 
 
 
271 aa  394  1e-109  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0592  short-chain dehydrogenase/reductase SDR  77.07 
 
 
271 aa  394  1e-109  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0410788 
 
 
-
 
NC_008542  Bcen2424_0624  short-chain dehydrogenase/reductase SDR  77.07 
 
 
271 aa  394  1e-109  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0853252  n/a   
 
 
-
 
NC_006348  BMA2483  short chain dehydrogenase/reductase family oxidoreductase  71.64 
 
 
268 aa  389  1e-107  Burkholderia mallei ATCC 23344  Bacteria  normal  0.709099  n/a   
 
 
-
 
NC_009076  BURPS1106A_3483  NAD dependent epimerase/dehydratase family protein  71.64 
 
 
271 aa  389  1e-107  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0403  short chain dehydrogenase/reductase family oxidoreductase  71.64 
 
 
268 aa  389  1e-107  Burkholderia mallei SAVP1  Bacteria  normal  0.253369  n/a   
 
 
-
 
NC_007434  BURPS1710b_3480  short chain dehydrogenase/reductase family oxidoreductase  71.64 
 
 
268 aa  389  1e-107  Burkholderia pseudomallei 1710b  Bacteria  normal  0.538943  n/a   
 
 
-
 
NC_009074  BURPS668_3445  NAD dependent epimerase/dehydratase family protein  71.64 
 
 
268 aa  389  1e-107  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3302  short chain dehydrogenase/reductase family oxidoreductase  71.64 
 
 
268 aa  389  1e-107  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1263  short chain dehydrogenase/reductase family oxidoreductase  71.64 
 
 
268 aa  389  1e-107  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1182  short chain dehydrogenase/reductase family oxidoreductase  75.7 
 
 
271 aa  376  1e-103  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0433  short-chain dehydrogenase/reductase SDR  66.27 
 
 
254 aa  348  7e-95  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_5073  short-chain dehydrogenase/reductase SDR  60.47 
 
 
261 aa  289  4e-77  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0771  GntR family transcriptional regulator  56.8 
 
 
256 aa  288  9e-77  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00515913  normal  0.0552536 
 
 
-
 
NC_011365  Gdia_0389  short-chain dehydrogenase/reductase SDR  58.57 
 
 
261 aa  284  8e-76  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.132836  normal  0.554145 
 
 
-
 
NC_009654  Mmwyl1_4106  short-chain dehydrogenase/reductase SDR  55.42 
 
 
256 aa  283  3.0000000000000004e-75  Marinomonas sp. MWYL1  Bacteria  normal  decreased coverage  0.00000000241543 
 
 
-
 
NC_007912  Sde_0761  putative oxidoreductase  53.85 
 
 
255 aa  278  9e-74  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.429001 
 
 
-
 
NC_012560  Avin_51440  Short-chain dehydrogenase/reductase (SDR) family protein  57.43 
 
 
260 aa  266  2e-70  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_2599  short-chain dehydrogenase/reductase SDR  52.34 
 
 
257 aa  265  8e-70  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1990  short-chain dehydrogenase/reductase SDR  52.4 
 
 
256 aa  258  7e-68  Shewanella sp. MR-7  Bacteria  normal  0.0224708  unclonable  0.0000202886 
 
 
-
 
NC_008577  Shewana3_2071  short-chain dehydrogenase/reductase SDR  52.4 
 
 
256 aa  258  8e-68  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00640028  hitchhiker  0.00000248708 
 
 
-
 
NC_012791  Vapar_1041  short-chain dehydrogenase/reductase SDR  54.03 
 
 
258 aa  256  2e-67  Variovorax paradoxus S110  Bacteria  normal  0.208357  n/a   
 
 
-
 
NC_011663  Sbal223_2145  short-chain dehydrogenase/reductase SDR  51.2 
 
 
256 aa  256  3e-67  Shewanella baltica OS223  Bacteria  normal  0.0597739  normal  0.690345 
 
 
-
 
NC_008321  Shewmr4_1984  short-chain dehydrogenase/reductase SDR  52 
 
 
256 aa  254  1.0000000000000001e-66  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00682949  normal  0.0302653 
 
 
-
 
NC_008786  Veis_0735  short-chain dehydrogenase/reductase SDR  52.36 
 
 
270 aa  253  2.0000000000000002e-66  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.304096  normal 
 
 
-
 
NC_012857  Rpic12D_4189  short-chain dehydrogenase/reductase SDR  52.99 
 
 
255 aa  253  3e-66  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4077  short-chain dehydrogenase/reductase SDR  52.99 
 
 
255 aa  253  3e-66  Ralstonia pickettii 12J  Bacteria  normal  0.13973  normal 
 
 
-
 
NC_009438  Sputcn32_2061  short-chain dehydrogenase/reductase SDR  50.8 
 
 
256 aa  251  1e-65  Shewanella putrefaciens CN-32  Bacteria  normal  0.138185  n/a   
 
 
-
 
NC_010505  Mrad2831_5401  short-chain dehydrogenase/reductase SDR  51.6 
 
 
258 aa  247  1e-64  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2374  short-chain dehydrogenase/reductase SDR  50 
 
 
251 aa  243  1.9999999999999999e-63  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3587  short-chain dehydrogenase/reductase SDR  53.41 
 
 
255 aa  241  1e-62  Chelativorans sp. BNC1  Bacteria  normal  0.435673  n/a   
 
 
-
 
NC_007953  Bxe_C1363  D-xylose dehydrogenase  48.21 
 
 
268 aa  239  4e-62  Burkholderia xenovorans LB400  Bacteria  normal  0.879722  normal  0.999685 
 
 
-
 
NC_008752  Aave_2258  short-chain dehydrogenase/reductase SDR  50.19 
 
 
271 aa  233  3e-60  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0225727  hitchhiker  0.000000282328 
 
 
-
 
NC_007493  RSP_1369  Short-chain dehydrogenase/reductase SDR  50 
 
 
260 aa  231  1e-59  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0037  short-chain dehydrogenase/reductase SDR  49.8 
 
 
260 aa  228  6e-59  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_0027  short-chain dehydrogenase/reductase SDR  50.4 
 
 
288 aa  224  1e-57  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3834  short-chain dehydrogenase/reductase SDR  44.4 
 
 
256 aa  220  1.9999999999999999e-56  Jannaschia sp. CCS1  Bacteria  normal  0.140905  normal 
 
 
-
 
NC_008786  Veis_0941  short-chain dehydrogenase/reductase SDR  48.58 
 
 
251 aa  216  2.9999999999999998e-55  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.995863 
 
 
-
 
NC_008043  TM1040_3488  short-chain dehydrogenase/reductase SDR  45.9 
 
 
256 aa  214  9.999999999999999e-55  Ruegeria sp. TM1040  Bacteria  normal  normal  0.742718 
 
 
-
 
NC_009654  Mmwyl1_0516  short-chain dehydrogenase/reductase SDR  47.18 
 
 
254 aa  214  9.999999999999999e-55  Marinomonas sp. MWYL1  Bacteria  normal  0.098133  normal 
 
 
-
 
NC_008228  Patl_3529  short-chain dehydrogenase/reductase SDR  42.21 
 
 
270 aa  205  6e-52  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1243  short-chain dehydrogenase/reductase SDR  46.69 
 
 
258 aa  200  1.9999999999999998e-50  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.455666  normal  0.236793 
 
 
-
 
NC_011369  Rleg2_0503  short-chain dehydrogenase/reductase SDR  48.19 
 
 
253 aa  199  3e-50  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
BN001304  ANIA_07128  conserved hypothetical protein  39.25 
 
 
275 aa  199  3.9999999999999996e-50  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00131023  normal  0.0770254 
 
 
-
 
NC_010338  Caul_4001  short-chain dehydrogenase/reductase SDR  43.25 
 
 
259 aa  197  1.0000000000000001e-49  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0546  short-chain dehydrogenase/reductase SDR  47.39 
 
 
257 aa  196  4.0000000000000005e-49  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0438  short-chain dehydrogenase/reductase SDR  44.18 
 
 
256 aa  192  4e-48  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.285603 
 
 
-
 
NC_007963  Csal_1729  D-xylose dehydrogenase  45.2 
 
 
245 aa  184  9e-46  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.380531  n/a   
 
 
-
 
NC_010506  Swoo_3666  short-chain dehydrogenase/reductase SDR  39 
 
 
255 aa  176  5e-43  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00136979  normal 
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  36.36 
 
 
254 aa  149  3e-35  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_010003  Pmob_0729  short-chain dehydrogenase/reductase SDR  33.61 
 
 
251 aa  142  5e-33  Petrotoga mobilis SJ95  Bacteria  normal  0.0262547  n/a   
 
 
-
 
NC_009767  Rcas_3851  short-chain dehydrogenase/reductase SDR  35.22 
 
 
256 aa  140  1.9999999999999998e-32  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.575902  normal  0.466968 
 
 
-
 
NC_009427  Saro_3667  short-chain dehydrogenase/reductase SDR  36.44 
 
 
259 aa  137  2e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1429  short-chain dehydrogenase/reductase SDR  36.36 
 
 
256 aa  137  2e-31  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007950  Bpro_5564  short-chain dehydrogenase/reductase SDR  35.54 
 
 
250 aa  136  4e-31  Polaromonas sp. JS666  Bacteria  normal  0.0387947  normal 
 
 
-
 
NC_008782  Ajs_2100  short-chain dehydrogenase/reductase SDR  34.3 
 
 
250 aa  135  5e-31  Acidovorax sp. JS42  Bacteria  normal  0.0527344  normal 
 
 
-
 
NC_013411  GYMC61_1779  short-chain dehydrogenase/reductase SDR  32.52 
 
 
249 aa  134  9.999999999999999e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010335  Caul_5136  short-chain dehydrogenase/reductase SDR  34.41 
 
 
254 aa  134  9.999999999999999e-31  Caulobacter sp. K31  Bacteria  normal  0.708802  normal 
 
 
-
 
NC_013730  Slin_1373  3-oxoacyl-(acyl-carrier-protein) reductase  37.5 
 
 
248 aa  134  1.9999999999999998e-30  Spirosoma linguale DSM 74  Bacteria  normal  0.124306  normal 
 
 
-
 
NC_013510  Tcur_3357  short-chain dehydrogenase/reductase SDR  34.63 
 
 
253 aa  134  1.9999999999999998e-30  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00078495  n/a   
 
 
-
 
NC_009524  PsycPRwf_0909  short-chain dehydrogenase/reductase SDR  34.27 
 
 
244 aa  133  3e-30  Psychrobacter sp. PRwf-1  Bacteria  normal  0.271894  normal 
 
 
-
 
NC_009338  Mflv_3281  short-chain dehydrogenase/reductase SDR  37.19 
 
 
248 aa  132  3.9999999999999996e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.846295 
 
 
-
 
NC_012034  Athe_1156  3-oxoacyl-(acyl-carrier-protein) reductase  34.41 
 
 
248 aa  132  3.9999999999999996e-30  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000536759  n/a   
 
 
-
 
NC_009719  Plav_1760  short-chain dehydrogenase/reductase SDR  30.71 
 
 
250 aa  132  6.999999999999999e-30  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.141854 
 
 
-
 
NC_008781  Pnap_1241  short-chain dehydrogenase/reductase SDR  35.66 
 
 
260 aa  131  1.0000000000000001e-29  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0407787  normal  0.415093 
 
 
-
 
NC_002947  PP_1852  3-ketoacyl-(acyl-carrier-protein) reductase  39.6 
 
 
249 aa  130  2.0000000000000002e-29  Pseudomonas putida KT2440  Bacteria  normal  0.454003  normal 
 
 
-
 
NC_012918  GM21_2843  short-chain dehydrogenase/reductase SDR  33.99 
 
 
255 aa  130  2.0000000000000002e-29  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008254  Meso_3704  short-chain dehydrogenase/reductase SDR  31.98 
 
 
257 aa  130  2.0000000000000002e-29  Chelativorans sp. BNC1  Bacteria  normal  0.416119  n/a   
 
 
-
 
NC_008391  Bamb_4102  short chain dehydrogenase  34.92 
 
 
256 aa  130  2.0000000000000002e-29  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.188504 
 
 
-
 
NC_008752  Aave_2790  short-chain dehydrogenase/reductase SDR  37.04 
 
 
269 aa  130  2.0000000000000002e-29  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2741  short-chain dehydrogenase/reductase SDR  37.5 
 
 
245 aa  130  3e-29  Mycobacterium sp. JLS  Bacteria  normal  0.67028  normal  0.072064 
 
 
-
 
NC_011898  Ccel_1173  short-chain dehydrogenase/reductase SDR  31.64 
 
 
256 aa  130  3e-29  Clostridium cellulolyticum H10  Bacteria  normal  0.0283651  n/a   
 
 
-
 
NC_008726  Mvan_3000  short-chain dehydrogenase/reductase SDR  36.78 
 
 
248 aa  130  3e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.767749  normal  0.280666 
 
 
-
 
NC_009901  Spea_2148  short-chain dehydrogenase/reductase SDR  34.52 
 
 
247 aa  129  4.0000000000000003e-29  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_2711  short-chain dehydrogenase/reductase SDR  37.08 
 
 
245 aa  129  5.0000000000000004e-29  Mycobacterium sp. MCS  Bacteria  normal  0.561182  n/a   
 
 
-
 
NC_008705  Mkms_2755  short-chain dehydrogenase/reductase SDR  37.08 
 
 
245 aa  129  5.0000000000000004e-29  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1022  short chain dehydrogenase  32.14 
 
 
261 aa  129  6e-29  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.917277  n/a   
 
 
-
 
NC_009512  Pput_3860  3-ketoacyl-(acyl-carrier-protein) reductase  39.6 
 
 
249 aa  129  6e-29  Pseudomonas putida F1  Bacteria  normal  0.840744  normal  0.0763537 
 
 
-
 
NC_010322  PputGB1_1428  3-ketoacyl-(acyl-carrier-protein) reductase  39.6 
 
 
249 aa  129  6e-29  Pseudomonas putida GB-1  Bacteria  normal  normal  0.596689 
 
 
-
 
NC_007794  Saro_0512  short-chain dehydrogenase/reductase SDR  35.22 
 
 
248 aa  128  7.000000000000001e-29  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0695  3-oxoacyl-(acyl-carrier-protein) reductase  35.66 
 
 
247 aa  128  9.000000000000001e-29  Pedobacter heparinus DSM 2366  Bacteria  normal  0.825403  normal 
 
 
-
 
NC_003296  RS05466  dehydrogenase oxidoreductase protein  34.01 
 
 
255 aa  128  1.0000000000000001e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  0.968817  normal  0.104137 
 
 
-
 
NC_007488  RSP_3963  Short-chain dehydrogenase/reductase SDR  35.92 
 
 
251 aa  128  1.0000000000000001e-28  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.680971  n/a   
 
 
-
 
NC_008687  Pden_3583  short-chain dehydrogenase/reductase SDR  34.54 
 
 
279 aa  128  1.0000000000000001e-28  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1500  short chain dehydrogenase  34.41 
 
 
256 aa  127  2.0000000000000002e-28  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_3320  short chain dehydrogenase  35.2 
 
 
262 aa  127  2.0000000000000002e-28  Cupriavidus metallidurans CH34  Bacteria  normal  0.694446  normal 
 
 
-
 
NC_012793  GWCH70_1779  short-chain dehydrogenase/reductase SDR  33.33 
 
 
254 aa  127  2.0000000000000002e-28  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4234  short chain dehydrogenase  33.33 
 
 
252 aa  126  3e-28  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_22070  short chain dehydrogenase  35.25 
 
 
252 aa  127  3e-28  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2365  short-chain dehydrogenase/reductase SDR  36.9 
 
 
249 aa  126  4.0000000000000003e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0450975 
 
 
-
 
NC_010512  Bcenmc03_6360  short chain dehydrogenase  34.27 
 
 
262 aa  126  4.0000000000000003e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4567  short chain dehydrogenase  34.13 
 
 
256 aa  126  4.0000000000000003e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  0.16205  hitchhiker  0.000267636 
 
 
-
 
NC_009075  BURPS668_A1308  short chain dehydrogenase  34.54 
 
 
256 aa  126  4.0000000000000003e-28  Burkholderia pseudomallei 668  Bacteria  normal  0.480054  n/a   
 
 
-
 
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