| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4567 |
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| Symbol | |
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| ID | 6180031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1674037 |
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| End bp | 1674807 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641684328 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001811239 |
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| Protein GI | 172063588 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.16205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000267636 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGAGT TCGCTCCGGT CGTGTCGCTG CCGGGGCGCC GCGTGCTCGT CACGGGCGGC
GCCCGCGGTC TCGGCGCGGC GTTCGTGAAG GCGCTGGTCG CGGCGGGCGC GCAGGTCGCG
TTCGGCGACG TGCTCGCCGA AGAGGGCCGC ACGCTGGCTG CGGAACTCAC ACAAGCAGGC
CACACCGCGC ATTTCTTCGC GCTCGACCTG GCCGATCCGG CGAGCGTCGA TGCATTCGTC
GCGCAGAGTG CGGCGGCGCT CGGCGGCATC GACGCGCTGA TCAACAACGC GGCGATCACG
AACTCGGGCG GCAGGCTGTC GACGGAACTC GACGTGCCGA CCTGGGATGC CGTGATGAAC
GTGAACGTGC GCGGCGTGTG GCTCGTCAGC AATGCGGCGC TGCCGCACCT CGCGCGCTCG
GGCCGCGGCG CGATCGTGAA CCTCGCGTCG GACACCGCGT TGTGGGGCGC GCCGAAGCTG
CTCGCGTACG TCGCCAGCAA GGGCGCCGTG ATCGCGATGA CGCATGCGCA GGCTCGCGAG
TTCGGCGCAC ACGGCGTGAC GGTCAACGCG ATCGCGCCGG GGCTCACCGA AGTCGAGGCG
ACCGCCTACG TGCCGGCCGA ACGGCATGCG TTCTACATGC AGGGCCGCGC GCTCACGCGC
GCGCAGGTGC CCGACGACGT GACGGGCCCC GTGCTGTTCC TGCTGTCGGA CGGCGCGCGC
TTCGTGACGG GTCAGCTGCT GCCGGTGAAC GGCGGCTTCG TGATGAATTG A
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| Protein sequence | MAEFAPVVSL PGRRVLVTGG ARGLGAAFVK ALVAAGAQVA FGDVLAEEGR TLAAELTQAG
HTAHFFALDL ADPASVDAFV AQSAAALGGI DALINNAAIT NSGGRLSTEL DVPTWDAVMN
VNVRGVWLVS NAALPHLARS GRGAIVNLAS DTALWGAPKL LAYVASKGAV IAMTHAQARE
FGAHGVTVNA IAPGLTEVEA TAYVPAERHA FYMQGRALTR AQVPDDVTGP VLFLLSDGAR
FVTGQLLPVN GGFVMN
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