| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4077 |
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| Symbol | |
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| ID | 6285438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 351865 |
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| End bp | 352632 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642618566 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001892607 |
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| Protein GI | 187926262 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.13973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTATG CGATTTATCC GAGCCTTGTT AACAAGAACG TTGTGATTAC CGGCGGCGGT
AGCGGCATTG GCGCTGCCAT TGTCGAAGGC TTTGCCAAAC AGGGCGCGCG TGTGACGTTC
CTCGATATCG CCCGTGCCGA CTCAGAAGCG CTGGCGTCGT CGCTGGGCGA GTGCGTGCAT
CCGCCGGTCT TCCGCTACTG CGACTTGCGC GACATCGACA CGTTGAACGC CACGTTCTCG
GATATCGAGG CCGACACCGG CCCCATCGAC GTGCTGATCA ACAACGCCGC CAATGATGAC
CGCCATCAGA TCGGAACCGT GACCCAGGCC TATTGGGACA ACCGCATCGA GGTGAACCTG
CGCCATCAGT TCTTCTGCGC GCAGGCCGTG CTGCCCAGCA TGAAGAAGCG GGGGCACGGC
GTGATCCTCA ACCTTGGGTC CATCTCGTGG CACCTTGCCC AGGCGGACCT CGCCATCTAC
ATGACGGCCA AGGCCGGCAT CGAGGGCCTG ACGCGCGGTC TGGCGCGTGA TCTGGGCGGA
TTCGGCATTC GCGTCAATTG CATCGTGCCC GGCGCGGTGC GCACGCCGCG GCAGATGGCG
CTCTGGCAAT CGCCCGAGAG CGAAGCCAAG CTGCTGGGCG AGCAATGCCT GCATGAGCGT
GTCGACCCTG AACATGTGGC ACGTATGGCG CTTTTTCTTG CGTCGGACGA TGCCGCGCGT
TGCACAGCGC GCGAGTACTT TGTCGATGCC GGGTGGTACG GCGGATGA
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| Protein sequence | MSYAIYPSLV NKNVVITGGG SGIGAAIVEG FAKQGARVTF LDIARADSEA LASSLGECVH
PPVFRYCDLR DIDTLNATFS DIEADTGPID VLINNAANDD RHQIGTVTQA YWDNRIEVNL
RHQFFCAQAV LPSMKKRGHG VILNLGSISW HLAQADLAIY MTAKAGIEGL TRGLARDLGG
FGIRVNCIVP GAVRTPRQMA LWQSPESEAK LLGEQCLHER VDPEHVARMA LFLASDDAAR
CTAREYFVDA GWYGG
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