| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1182 |
|---|
| Symbol | |
|---|
| ID | 3847259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 1328687 |
|---|
| End bp | 1329502 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637840854 |
|---|
| Product | short chain dehydrogenase/reductase family oxidoreductase |
|---|
| Protein accession | YP_441729 |
|---|
| Protein GI | 83718723 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA TTGCCTCGCA TCGCGAATCG AACGGCGCGC GCAGCGCGCA AGACGAGCGT
TACGCACGCT ACCCGAGCCT CGCCGGGCGC GCGGTGCTGA TCACGGGCGG CGCGACGGGC
ATCGGCGCGT CGTTCGTCGA ACACTTCGCG CGGCAGGGCG CGCGCGTCGC GTTCGTCGAT
CTCGACGAAC AAGCCGCGCG CGCGCTCGCC GCGCGGCTTG CCGACGCCGC GCACGAACCG
GTGTTCGTCG CGTGCGACCT GACCGACATC GCCGCGCTGC GCGGCGCGAT CGAAGCGATC
CGCGCGCGCA TCGGCCCGAT CGCGGCGCTC GTGAACAACG CGGCGAACGA CGTGCGCCAC
GCGATCGCCG ACGTGACGCC CGATTCGTTC GACGCGTGCA TCGCGGTGAA CCTGCGCCAT
CAGTTCTTCG CCGCGCAGGC GGTGATCGAC GACATGAAGC GGCTGGGCGG CGGCTCGATC
GTCAATCTCG GCTCGATCAG CTGGATGCTG AAGAACGCCG GCTATCCGGT CTACGCGAGC
GCGAAGGCGG CGGTGCAGGG GCTCACGCGC GCGCTCGCGC GCGAGCTCGG GCCGTTCGGC
ATTCGCGTGA ATACGCTCGT GCCCGGCTGG GTGATGACCG ACAAGCAGCG TCGCTTGTGG
CTCGACGACG CGGGCCGCGC GGCGATCAAG GCGGGGCAGT GCATCGACGC GGAGCTGCTT
CCGGGCGACC TCGCGCGGAT GGCGCTCTTT CTCGCGGCGG ACGACAGCCG GATGATCACC
GCGCAGGACG TTGTCGTCGA CGGCGGCTGG GCATAG
|
|---|
| Protein sequence | MSDIASHRES NGARSAQDER YARYPSLAGR AVLITGGATG IGASFVEHFA RQGARVAFVD
LDEQAARALA ARLADAAHEP VFVACDLTDI AALRGAIEAI RARIGPIAAL VNNAANDVRH
AIADVTPDSF DACIAVNLRH QFFAAQAVID DMKRLGGGSI VNLGSISWML KNAGYPVYAS
AKAAVQGLTR ALARELGPFG IRVNTLVPGW VMTDKQRRLW LDDAGRAAIK AGQCIDAELL
PGDLARMALF LAADDSRMIT AQDVVVDGGW A
|
|---|
| |