More than 300 homologs were found in PanDaTox collection
for query gene Bphy_2612 on replicon NC_010622
Organism: Burkholderia phymatum STM815



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010622  Bphy_2612  short-chain dehydrogenase/reductase SDR  100 
 
 
266 aa  538  9.999999999999999e-153  Burkholderia phymatum STM815  Bacteria  normal  normal  0.227086 
 
 
-
 
NC_010681  Bphyt_3408  short-chain dehydrogenase/reductase SDR  85.71 
 
 
266 aa  467  1.0000000000000001e-131  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0359384  normal  0.0764099 
 
 
-
 
NC_007951  Bxe_A0549  putative short-chain dehydrogenase/reductase, FabG-like  85.71 
 
 
266 aa  464  9.999999999999999e-131  Burkholderia xenovorans LB400  Bacteria  normal  0.204322  normal  0.437639 
 
 
-
 
NC_010084  Bmul_2761  short-chain dehydrogenase/reductase SDR  76.25 
 
 
264 aa  405  1.0000000000000001e-112  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.386853 
 
 
-
 
NC_007510  Bcep18194_A3706  Short-chain dehydrogenase/reductase SDR  77.65 
 
 
268 aa  401  1e-111  Burkholderia sp. 383  Bacteria  normal  0.283086  normal  0.654023 
 
 
-
 
NC_010551  BamMC406_0549  short-chain dehydrogenase/reductase SDR  77.95 
 
 
270 aa  397  9.999999999999999e-111  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.00753595  normal  0.67708 
 
 
-
 
NC_008390  Bamb_0525  short-chain dehydrogenase/reductase SDR  77.56 
 
 
271 aa  398  9.999999999999999e-111  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2483  short chain dehydrogenase/reductase family oxidoreductase  73.33 
 
 
268 aa  385  1e-106  Burkholderia mallei ATCC 23344  Bacteria  normal  0.709099  n/a   
 
 
-
 
NC_007434  BURPS1710b_3480  short chain dehydrogenase/reductase family oxidoreductase  73.33 
 
 
268 aa  385  1e-106  Burkholderia pseudomallei 1710b  Bacteria  normal  0.538943  n/a   
 
 
-
 
NC_009076  BURPS1106A_3483  NAD dependent epimerase/dehydratase family protein  73.33 
 
 
271 aa  385  1e-106  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1263  short chain dehydrogenase/reductase family oxidoreductase  73.33 
 
 
268 aa  385  1e-106  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3445  NAD dependent epimerase/dehydratase family protein  73.33 
 
 
268 aa  385  1e-106  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0403  short chain dehydrogenase/reductase family oxidoreductase  73.33 
 
 
268 aa  385  1e-106  Burkholderia mallei SAVP1  Bacteria  normal  0.253369  n/a   
 
 
-
 
NC_009080  BMA10247_3302  short chain dehydrogenase/reductase family oxidoreductase  73.33 
 
 
268 aa  385  1e-106  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0592  short-chain dehydrogenase/reductase SDR  78.49 
 
 
271 aa  381  1e-105  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0410788 
 
 
-
 
NC_008060  Bcen_0141  short-chain dehydrogenase/reductase SDR  78.49 
 
 
271 aa  381  1e-105  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0624  short-chain dehydrogenase/reductase SDR  78.49 
 
 
271 aa  381  1e-105  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0853252  n/a   
 
 
-
 
NC_007651  BTH_I1182  short chain dehydrogenase/reductase family oxidoreductase  73.75 
 
 
271 aa  373  1e-102  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0433  short-chain dehydrogenase/reductase SDR  65.48 
 
 
254 aa  345  3e-94  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_5073  short-chain dehydrogenase/reductase SDR  60.08 
 
 
261 aa  283  2.0000000000000002e-75  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4106  short-chain dehydrogenase/reductase SDR  53.82 
 
 
256 aa  278  7e-74  Marinomonas sp. MWYL1  Bacteria  normal  decreased coverage  0.00000000241543 
 
 
-
 
NC_007912  Sde_0771  GntR family transcriptional regulator  54 
 
 
256 aa  271  9e-72  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00515913  normal  0.0552536 
 
 
-
 
NC_011365  Gdia_0389  short-chain dehydrogenase/reductase SDR  55.51 
 
 
261 aa  267  1e-70  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.132836  normal  0.554145 
 
 
-
 
NC_007912  Sde_0761  putative oxidoreductase  51.82 
 
 
255 aa  262  4e-69  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.429001 
 
 
-
 
NC_008322  Shewmr7_1990  short-chain dehydrogenase/reductase SDR  52.4 
 
 
256 aa  255  6e-67  Shewanella sp. MR-7  Bacteria  normal  0.0224708  unclonable  0.0000202886 
 
 
-
 
NC_008577  Shewana3_2071  short-chain dehydrogenase/reductase SDR  52.4 
 
 
256 aa  254  8e-67  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00640028  hitchhiker  0.00000248708 
 
 
-
 
NC_012791  Vapar_1041  short-chain dehydrogenase/reductase SDR  52.82 
 
 
258 aa  253  3e-66  Variovorax paradoxus S110  Bacteria  normal  0.208357  n/a   
 
 
-
 
NC_008254  Meso_3587  short-chain dehydrogenase/reductase SDR  54.22 
 
 
255 aa  251  8.000000000000001e-66  Chelativorans sp. BNC1  Bacteria  normal  0.435673  n/a   
 
 
-
 
NC_008321  Shewmr4_1984  short-chain dehydrogenase/reductase SDR  52 
 
 
256 aa  251  8.000000000000001e-66  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00682949  normal  0.0302653 
 
 
-
 
NC_012560  Avin_51440  Short-chain dehydrogenase/reductase (SDR) family protein  53.73 
 
 
260 aa  251  9.000000000000001e-66  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2145  short-chain dehydrogenase/reductase SDR  50.8 
 
 
256 aa  248  1e-64  Shewanella baltica OS223  Bacteria  normal  0.0597739  normal  0.690345 
 
 
-
 
NC_010678  Rpic_4077  short-chain dehydrogenase/reductase SDR  52.19 
 
 
255 aa  245  4.9999999999999997e-64  Ralstonia pickettii 12J  Bacteria  normal  0.13973  normal 
 
 
-
 
NC_012857  Rpic12D_4189  short-chain dehydrogenase/reductase SDR  52.19 
 
 
255 aa  245  4.9999999999999997e-64  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0735  short-chain dehydrogenase/reductase SDR  48.69 
 
 
270 aa  245  6e-64  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.304096  normal 
 
 
-
 
NC_009484  Acry_2599  short-chain dehydrogenase/reductase SDR  50.79 
 
 
257 aa  243  1.9999999999999999e-63  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2061  short-chain dehydrogenase/reductase SDR  50.4 
 
 
256 aa  242  3.9999999999999997e-63  Shewanella putrefaciens CN-32  Bacteria  normal  0.138185  n/a   
 
 
-
 
NC_007953  Bxe_C1363  D-xylose dehydrogenase  49 
 
 
268 aa  240  1e-62  Burkholderia xenovorans LB400  Bacteria  normal  0.879722  normal  0.999685 
 
 
-
 
NC_007802  Jann_2374  short-chain dehydrogenase/reductase SDR  50.4 
 
 
251 aa  238  1e-61  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5401  short-chain dehydrogenase/reductase SDR  50 
 
 
258 aa  234  9e-61  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0516  short-chain dehydrogenase/reductase SDR  49.6 
 
 
254 aa  225  5.0000000000000005e-58  Marinomonas sp. MWYL1  Bacteria  normal  0.098133  normal 
 
 
-
 
NC_008752  Aave_2258  short-chain dehydrogenase/reductase SDR  48.67 
 
 
271 aa  221  7e-57  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0225727  hitchhiker  0.000000282328 
 
 
-
 
NC_008786  Veis_0941  short-chain dehydrogenase/reductase SDR  48.99 
 
 
251 aa  217  2e-55  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.995863 
 
 
-
 
NC_007493  RSP_1369  Short-chain dehydrogenase/reductase SDR  48.02 
 
 
260 aa  213  1.9999999999999998e-54  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0037  short-chain dehydrogenase/reductase SDR  47.62 
 
 
260 aa  212  4.9999999999999996e-54  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3488  short-chain dehydrogenase/reductase SDR  46.28 
 
 
256 aa  210  2e-53  Ruegeria sp. TM1040  Bacteria  normal  normal  0.742718 
 
 
-
 
NC_007802  Jann_3834  short-chain dehydrogenase/reductase SDR  42.4 
 
 
256 aa  209  5e-53  Jannaschia sp. CCS1  Bacteria  normal  0.140905  normal 
 
 
-
 
NC_009428  Rsph17025_0027  short-chain dehydrogenase/reductase SDR  48.03 
 
 
288 aa  206  4e-52  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1243  short-chain dehydrogenase/reductase SDR  46.69 
 
 
258 aa  203  3e-51  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.455666  normal  0.236793 
 
 
-
 
NC_008228  Patl_3529  short-chain dehydrogenase/reductase SDR  42.97 
 
 
270 aa  202  3e-51  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4001  short-chain dehydrogenase/reductase SDR  43.65 
 
 
259 aa  199  5e-50  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1729  D-xylose dehydrogenase  46.59 
 
 
245 aa  196  3e-49  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.380531  n/a   
 
 
-
 
NC_011369  Rleg2_0503  short-chain dehydrogenase/reductase SDR  46.59 
 
 
253 aa  195  6e-49  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0438  short-chain dehydrogenase/reductase SDR  43.78 
 
 
256 aa  194  1e-48  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.285603 
 
 
-
 
NC_012850  Rleg_0546  short-chain dehydrogenase/reductase SDR  45.38 
 
 
257 aa  189  2.9999999999999997e-47  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
BN001304  ANIA_07128  conserved hypothetical protein  37.36 
 
 
275 aa  188  8e-47  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00131023  normal  0.0770254 
 
 
-
 
NC_010506  Swoo_3666  short-chain dehydrogenase/reductase SDR  38.17 
 
 
255 aa  175  9e-43  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00136979  normal 
 
 
-
 
NC_009427  Saro_3667  short-chain dehydrogenase/reductase SDR  38.06 
 
 
259 aa  146  3e-34  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1173  short-chain dehydrogenase/reductase SDR  34.38 
 
 
256 aa  145  5e-34  Clostridium cellulolyticum H10  Bacteria  normal  0.0283651  n/a   
 
 
-
 
NC_010003  Pmob_0729  short-chain dehydrogenase/reductase SDR  34.02 
 
 
251 aa  142  5e-33  Petrotoga mobilis SJ95  Bacteria  normal  0.0262547  n/a   
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  35.97 
 
 
254 aa  141  9e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_014158  Tpau_3804  short-chain dehydrogenase/reductase SDR  37.89 
 
 
253 aa  141  9.999999999999999e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3357  short-chain dehydrogenase/reductase SDR  35.41 
 
 
253 aa  140  1.9999999999999998e-32  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00078495  n/a   
 
 
-
 
NC_008391  Bamb_4102  short chain dehydrogenase  35.71 
 
 
256 aa  139  3.9999999999999997e-32  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.188504 
 
 
-
 
NC_007488  RSP_3963  Short-chain dehydrogenase/reductase SDR  36.73 
 
 
251 aa  139  6e-32  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.680971  n/a   
 
 
-
 
NC_010676  Bphyt_6140  short-chain dehydrogenase/reductase SDR  37.96 
 
 
254 aa  137  3.0000000000000003e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.601598  normal 
 
 
-
 
NC_007517  Gmet_2249  Short-chain dehydrogenase/reductase SDR  34.96 
 
 
260 aa  136  4e-31  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000000113674  decreased coverage  1.89116e-19 
 
 
-
 
NC_009524  PsycPRwf_0909  short-chain dehydrogenase/reductase SDR  34.96 
 
 
244 aa  135  5e-31  Psychrobacter sp. PRwf-1  Bacteria  normal  0.271894  normal 
 
 
-
 
NC_010552  BamMC406_4567  short chain dehydrogenase  34.92 
 
 
256 aa  135  7.000000000000001e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  0.16205  hitchhiker  0.000267636 
 
 
-
 
NC_009712  Mboo_0405  short-chain dehydrogenase/reductase SDR  35.39 
 
 
245 aa  135  8e-31  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1106  short chain dehydrogenase  35.22 
 
 
256 aa  134  9.999999999999999e-31  Burkholderia sp. 383  Bacteria  normal  0.179926  normal  0.355646 
 
 
-
 
NC_010623  Bphy_4234  short chain dehydrogenase  34.15 
 
 
252 aa  134  9.999999999999999e-31  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A1308  short chain dehydrogenase  34.65 
 
 
256 aa  134  9.999999999999999e-31  Burkholderia pseudomallei 668  Bacteria  normal  0.480054  n/a   
 
 
-
 
NC_010335  Caul_5136  short-chain dehydrogenase/reductase SDR  35.57 
 
 
254 aa  134  9.999999999999999e-31  Caulobacter sp. K31  Bacteria  normal  0.708802  normal 
 
 
-
 
NC_010172  Mext_2090  short-chain dehydrogenase/reductase SDR  37.9 
 
 
249 aa  134  9.999999999999999e-31  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.120513 
 
 
-
 
NC_008781  Pnap_1241  short-chain dehydrogenase/reductase SDR  35.63 
 
 
260 aa  134  9.999999999999999e-31  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0407787  normal  0.415093 
 
 
-
 
NC_010725  Mpop_0259  short-chain dehydrogenase/reductase SDR  37.9 
 
 
249 aa  133  1.9999999999999998e-30  Methylobacterium populi BJ001  Bacteria  normal  normal  0.519285 
 
 
-
 
NC_011757  Mchl_2365  short-chain dehydrogenase/reductase SDR  37.9 
 
 
249 aa  134  1.9999999999999998e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0450975 
 
 
-
 
NC_007650  BTH_II1500  short chain dehydrogenase  35.22 
 
 
256 aa  133  3e-30  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0512  short-chain dehydrogenase/reductase SDR  36.84 
 
 
248 aa  133  3e-30  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4381  short-chain dehydrogenase/reductase SDR  37.5 
 
 
254 aa  133  3e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011370  Rleg2_6271  short-chain dehydrogenase/reductase SDR  34.66 
 
 
256 aa  132  3.9999999999999996e-30  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.28835 
 
 
-
 
NC_010511  M446_2746  short-chain dehydrogenase/reductase SDR  37.1 
 
 
249 aa  132  3.9999999999999996e-30  Methylobacterium sp. 4-46  Bacteria  normal  0.458004  normal  0.197887 
 
 
-
 
NC_008752  Aave_2790  short-chain dehydrogenase/reductase SDR  37.65 
 
 
269 aa  132  3.9999999999999996e-30  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA1335  short chain dehydrogenase  34.65 
 
 
256 aa  132  5e-30  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1235  short chain dehydrogenase  34.65 
 
 
256 aa  132  5e-30  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0318  short chain dehydrogenase  34.65 
 
 
256 aa  132  5e-30  Burkholderia mallei SAVP1  Bacteria  normal  0.594764  n/a   
 
 
-
 
NC_008835  BMA10229_0594  short chain dehydrogenase  34.65 
 
 
256 aa  132  5e-30  Burkholderia mallei NCTC 10229  Bacteria  normal  0.512344  n/a   
 
 
-
 
NC_009079  BMA10247_A0973  short chain dehydrogenase  34.65 
 
 
256 aa  132  5e-30  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2495  short chain dehydrogenase  34.65 
 
 
256 aa  132  6e-30  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3851  short-chain dehydrogenase/reductase SDR  34.41 
 
 
256 aa  132  6e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.575902  normal  0.466968 
 
 
-
 
NC_009077  Mjls_3782  short-chain dehydrogenase/reductase SDR  34.38 
 
 
282 aa  132  9e-30  Mycobacterium sp. JLS  Bacteria  normal  0.25135  normal 
 
 
-
 
NC_008146  Mmcs_3770  short-chain dehydrogenase/reductase SDR  34.38 
 
 
282 aa  131  1.0000000000000001e-29  Mycobacterium sp. MCS  Bacteria  normal  0.694275  n/a   
 
 
-
 
NC_008705  Mkms_3843  short-chain dehydrogenase/reductase SDR  34.38 
 
 
282 aa  131  1.0000000000000001e-29  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1156  3-oxoacyl-(acyl-carrier-protein) reductase  33.2 
 
 
248 aa  130  2.0000000000000002e-29  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000536759  n/a   
 
 
-
 
NC_012793  GWCH70_1779  short-chain dehydrogenase/reductase SDR  32.93 
 
 
254 aa  130  2.0000000000000002e-29  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1454  short-chain dehydrogenase/reductase SDR  37.9 
 
 
249 aa  130  2.0000000000000002e-29  Polaromonas sp. JS666  Bacteria  normal  0.77933  normal  0.490701 
 
 
-
 
NC_010505  Mrad2831_3001  short-chain dehydrogenase/reductase SDR  37.75 
 
 
249 aa  130  2.0000000000000002e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1852  3-ketoacyl-(acyl-carrier-protein) reductase  37.85 
 
 
249 aa  130  3e-29  Pseudomonas putida KT2440  Bacteria  normal  0.454003  normal 
 
 
-
 
NC_012560  Avin_22070  short chain dehydrogenase  35.51 
 
 
252 aa  130  3e-29  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_2828  short-chain dehydrogenase/reductase SDR  36.48 
 
 
252 aa  130  3e-29  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0610793 
 
 
-
 
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