| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0433 |
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| Symbol | |
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| ID | 3962845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 438300 |
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| End bp | 439064 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637915264 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_521716 |
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| Protein GI | 89899245 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTTT TTGCCCAATA TCCCAGCCTG ACTGACCGGA CCGTGCTCAT TACAGGAGGT
GCCACCAGCA TTGGTGCCTG CCTTGTCGAG CAATTCACCG CCCAAGGCGC GAAGGTCGGC
TTTATCGATA TCGACACCGC GGCAGGATCG ACGCTGGCGA GCGCACTGGC CGGAGCGCGG
CACGCCCCGC TATTTGTTCA TGCTGACCTG ACAGACATCG CTGCGTTGGA GAGTGCCATC
GAAAAGGTGC GCCAGCACTT TGGTCCCATC AACGCACTGC TGAACAACGC TGCCAACGAT
CGCCGCCACA CCATTGAGGA GACCACCTCG GAGACGTGGG ATGCAGGCAT CGCCGTGAAC
CTGAAGCACC AGTTCTTTGC TGCTCGCAAC GTCGCACCAG ACATGCGCAA GGCCGGTGGC
GGCAGCATCG TGAATTTCGG TTCCCTTAGC TGGATGCTCA AGCAGGGGGG CATGCCAGTC
TACACAACAT CCAAATCTGC CGTGCAGGGA CTGACGCGCA GCCTCGCGCG CGATTTCGGT
CCATTCAACA TCCGGGTCAA CACACTGGTA CCGGGTTGGG TGATGACCGA AAAACAGCTG
CGCCTCTGGG TTGATGACGC AGCTCGCGCT GATATCGCGC GTGGCCAGTG CATCAACCAG
CCGGTATTGG CAGAGCACAT TGCCAGGATG GCGCTTTTTC TGGCGGCAGA CGACAGCGCC
ATGTGTACGG CACAGAATTT TGTGGTCGAT GGCGGCTGGG TGTGA
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| Protein sequence | MTVFAQYPSL TDRTVLITGG ATSIGACLVE QFTAQGAKVG FIDIDTAAGS TLASALAGAR
HAPLFVHADL TDIAALESAI EKVRQHFGPI NALLNNAAND RRHTIEETTS ETWDAGIAVN
LKHQFFAARN VAPDMRKAGG GSIVNFGSLS WMLKQGGMPV YTTSKSAVQG LTRSLARDFG
PFNIRVNTLV PGWVMTEKQL RLWVDDAARA DIARGQCINQ PVLAEHIARM ALFLAADDSA
MCTAQNFVVD GGWV
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