| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2374 |
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| Symbol | |
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| ID | 3934830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2379387 |
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| End bp | 2380142 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637904732 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_510316 |
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| Protein GI | 89054865 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC CGCAATTCGC CCGCTACCCC TCCCTCGACG GCGCGTCCGT GTTCATCACC
GGCGGCGCAT CTGGCATCGG TGCGGGCATG GTGCGGGCTT TCGCCGATCA GGGTGCTCAG
GTGGGGTTCG TGGATATGGA TGCGGACGGC GGCACCGCGC TGGCATCTGA AACCGGCGCG
ACCTTCGCCG CCTGTGATCT GCGCGATATC AACGGGTTAC GCAGCGCGTT CGCCACACTG
GCCGACGCCA ATGGCCCGGC GCAAGTGCTG GTCAACAATG CCGCCCGCGA TGACCGGCAT
AATTGGAAAG ACGTCACGCC GGAATATTGG GACGACCGTC AGAACACCAA CCTGCGCCAC
CAGTTCTTCG CGATTCAGGC CGTGGCCCCT GCGATGATCG CGGCGGGCAA GGGCTCCATC
ATCAACATGG GCTCCAATTC CTGGTGGGAG GCGGGCGGCG GTTTCCCGGC CTACGCCACC
GCCAAATCCG CCGCCCATGG GCTGACCCGC ACCATGGCCC GCGACCTTGG CCCCCACCGC
ATCCGCGTGA ACACGATTGT GCCAGGCTGG ATCATGACCG ACCGCCAAAG GGAGCTGTGG
GTGACGGAAG AGGCCCTGGA CGCCCAACTC AAGCGCCAGT GCCTGCCAGA CCCCATCGAC
CCGGTCTACG TCGTGCGCAT GGCGCTGTTT CTGGCCTCCG ACGACGCGGC GATGTGTTCG
GCCAACAATT ACATGGTGGA AGCGGGCTCG ATCTGA
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| Protein sequence | MTQPQFARYP SLDGASVFIT GGASGIGAGM VRAFADQGAQ VGFVDMDADG GTALASETGA
TFAACDLRDI NGLRSAFATL ADANGPAQVL VNNAARDDRH NWKDVTPEYW DDRQNTNLRH
QFFAIQAVAP AMIAAGKGSI INMGSNSWWE AGGGFPAYAT AKSAAHGLTR TMARDLGPHR
IRVNTIVPGW IMTDRQRELW VTEEALDAQL KRQCLPDPID PVYVVRMALF LASDDAAMCS
ANNYMVEAGS I
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