| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1500 |
|---|
| Symbol | |
|---|
| ID | 3845298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 1769873 |
|---|
| End bp | 1770643 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637838802 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_439696 |
|---|
| Protein GI | 83716773 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC CCATGCAGGC GATCGCGCTC GCGGGCCGCC GCGTGCTCGT CACGGGCGGT
GCGCGCGGGC TCGGCGCGGC GTTCGTCGAG GCGCTCGTCG CGGCGGGCGC GAAGGTCGCG
TTCGGCGACG TGCTCGACGC GCAAGGCCGC GCGCTCGCGC AGCGTTTGCG CGATGCGGGC
CACGACGCGC ATTTCGTCGC GCTCGACCTC GCGGAGCCGG CAAGCGTCGC CGCCTTCGTC
GACGAAGGCG CACGCGTGCT CGGCGGCATC GACGGCCTCG TCAATAACGC GGCGATCACG
AATTCGGGCG GCAAGCGCGC GGCCGAGCTT TCGATCGGCA TGTGGGACTC GGTGATGAAC
GTCAACGTGC GCGGCGTCTG GCTCGCGTGC AACGCGGCGC TGCCGCATCT CGTGCGCTCG
GGGCGCGGCG CGATCGTGAA TCTCGCGTCC GACACCGCGT TGTGGGGCGC GCCGAAGCTG
CTCGCCTATG TCGCGAGCAA GGGCGCGGTG ATCGCGATGA CGCACGCGCT CGCGCGCGAG
TTCGGCGAGC AGGGCGTGAC GGTCAACGCG ATCGCGCCGG GCCTGACCGA AGTCGAGGCG
ACCGCCTACG TGCCCGCCGA ACGCCACCAG TATTACCTGC AGGGCCGCGC GCTGCCGCGC
GCGCAAACGC CGGCCGACGT GACCGGGCCG GCGCTGTTCC TGCTGTCCGA CGCCGCACGC
TTCGTCACGG GGCAACTGCT GCCCGTGAAC GGCGGCTTCG TGATGCATTG A
|
|---|
| Protein sequence | MSAPMQAIAL AGRRVLVTGG ARGLGAAFVE ALVAAGAKVA FGDVLDAQGR ALAQRLRDAG
HDAHFVALDL AEPASVAAFV DEGARVLGGI DGLVNNAAIT NSGGKRAAEL SIGMWDSVMN
VNVRGVWLAC NAALPHLVRS GRGAIVNLAS DTALWGAPKL LAYVASKGAV IAMTHALARE
FGEQGVTVNA IAPGLTEVEA TAYVPAERHQ YYLQGRALPR AQTPADVTGP ALFLLSDAAR
FVTGQLLPVN GGFVMH
|
|---|
| |