More than 300 homologs were found in PanDaTox collection
for query gene BMA10247_3302 on replicon NC_009080
Organism: Burkholderia mallei NCTC 10247



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009074  BURPS668_3445  NAD dependent epimerase/dehydratase family protein  100 
 
 
268 aa  532  1e-150  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2483  short chain dehydrogenase/reductase family oxidoreductase  100 
 
 
268 aa  532  1e-150  Burkholderia mallei ATCC 23344  Bacteria  normal  0.709099  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0403  short chain dehydrogenase/reductase family oxidoreductase  100 
 
 
268 aa  532  1e-150  Burkholderia mallei SAVP1  Bacteria  normal  0.253369  n/a   
 
 
-
 
NC_007434  BURPS1710b_3480  short chain dehydrogenase/reductase family oxidoreductase  100 
 
 
268 aa  532  1e-150  Burkholderia pseudomallei 1710b  Bacteria  normal  0.538943  n/a   
 
 
-
 
NC_009080  BMA10247_3302  short chain dehydrogenase/reductase family oxidoreductase  100 
 
 
268 aa  532  1e-150  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1263  short chain dehydrogenase/reductase family oxidoreductase  100 
 
 
268 aa  532  1e-150  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3483  NAD dependent epimerase/dehydratase family protein  100 
 
 
271 aa  532  1e-150  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1182  short chain dehydrogenase/reductase family oxidoreductase  92.54 
 
 
271 aa  477  1e-133  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2761  short-chain dehydrogenase/reductase SDR  85.83 
 
 
264 aa  436  1e-121  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.386853 
 
 
-
 
NC_007510  Bcep18194_A3706  Short-chain dehydrogenase/reductase SDR  83.59 
 
 
268 aa  430  1e-119  Burkholderia sp. 383  Bacteria  normal  0.283086  normal  0.654023 
 
 
-
 
NC_008390  Bamb_0525  short-chain dehydrogenase/reductase SDR  83.01 
 
 
271 aa  427  1e-119  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0549  short-chain dehydrogenase/reductase SDR  81.41 
 
 
270 aa  424  1e-118  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.00753595  normal  0.67708 
 
 
-
 
NC_010508  Bcenmc03_0592  short-chain dehydrogenase/reductase SDR  81.58 
 
 
271 aa  410  1e-114  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0410788 
 
 
-
 
NC_008060  Bcen_0141  short-chain dehydrogenase/reductase SDR  81.58 
 
 
271 aa  410  1e-114  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0624  short-chain dehydrogenase/reductase SDR  81.58 
 
 
271 aa  410  1e-114  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0853252  n/a   
 
 
-
 
NC_007951  Bxe_A0549  putative short-chain dehydrogenase/reductase, FabG-like  71.64 
 
 
266 aa  389  1e-107  Burkholderia xenovorans LB400  Bacteria  normal  0.204322  normal  0.437639 
 
 
-
 
NC_010681  Bphyt_3408  short-chain dehydrogenase/reductase SDR  74.1 
 
 
266 aa  388  1e-107  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0359384  normal  0.0764099 
 
 
-
 
NC_010622  Bphy_2612  short-chain dehydrogenase/reductase SDR  73.33 
 
 
266 aa  385  1e-106  Burkholderia phymatum STM815  Bacteria  normal  normal  0.227086 
 
 
-
 
NC_007908  Rfer_0433  short-chain dehydrogenase/reductase SDR  63.2 
 
 
254 aa  328  4e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4106  short-chain dehydrogenase/reductase SDR  57.43 
 
 
256 aa  302  3.0000000000000004e-81  Marinomonas sp. MWYL1  Bacteria  normal  decreased coverage  0.00000000241543 
 
 
-
 
NC_012791  Vapar_5073  short-chain dehydrogenase/reductase SDR  58.23 
 
 
261 aa  280  2e-74  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0771  GntR family transcriptional regulator  54 
 
 
256 aa  278  1e-73  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00515913  normal  0.0552536 
 
 
-
 
NC_012560  Avin_51440  Short-chain dehydrogenase/reductase (SDR) family protein  58.23 
 
 
260 aa  271  1e-71  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0761  putative oxidoreductase  53.04 
 
 
255 aa  271  1e-71  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.429001 
 
 
-
 
NC_011365  Gdia_0389  short-chain dehydrogenase/reductase SDR  58.4 
 
 
261 aa  267  1e-70  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.132836  normal  0.554145 
 
 
-
 
NC_012791  Vapar_1041  short-chain dehydrogenase/reductase SDR  53.63 
 
 
258 aa  260  1e-68  Variovorax paradoxus S110  Bacteria  normal  0.208357  n/a   
 
 
-
 
NC_008577  Shewana3_2071  short-chain dehydrogenase/reductase SDR  51.6 
 
 
256 aa  258  5.0000000000000005e-68  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00640028  hitchhiker  0.00000248708 
 
 
-
 
NC_008322  Shewmr7_1990  short-chain dehydrogenase/reductase SDR  51.2 
 
 
256 aa  256  3e-67  Shewanella sp. MR-7  Bacteria  normal  0.0224708  unclonable  0.0000202886 
 
 
-
 
NC_008321  Shewmr4_1984  short-chain dehydrogenase/reductase SDR  51.2 
 
 
256 aa  255  6e-67  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00682949  normal  0.0302653 
 
 
-
 
NC_009484  Acry_2599  short-chain dehydrogenase/reductase SDR  52.8 
 
 
257 aa  254  1.0000000000000001e-66  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2061  short-chain dehydrogenase/reductase SDR  50 
 
 
256 aa  251  9.000000000000001e-66  Shewanella putrefaciens CN-32  Bacteria  normal  0.138185  n/a   
 
 
-
 
NC_011663  Sbal223_2145  short-chain dehydrogenase/reductase SDR  49.2 
 
 
256 aa  249  3e-65  Shewanella baltica OS223  Bacteria  normal  0.0597739  normal  0.690345 
 
 
-
 
NC_008786  Veis_0735  short-chain dehydrogenase/reductase SDR  51.17 
 
 
270 aa  246  3e-64  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.304096  normal 
 
 
-
 
NC_010505  Mrad2831_5401  short-chain dehydrogenase/reductase SDR  53.52 
 
 
258 aa  244  9e-64  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C1363  D-xylose dehydrogenase  50.8 
 
 
268 aa  242  3.9999999999999997e-63  Burkholderia xenovorans LB400  Bacteria  normal  0.879722  normal  0.999685 
 
 
-
 
NC_012857  Rpic12D_4189  short-chain dehydrogenase/reductase SDR  52.4 
 
 
255 aa  240  1e-62  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4077  short-chain dehydrogenase/reductase SDR  52.4 
 
 
255 aa  240  1e-62  Ralstonia pickettii 12J  Bacteria  normal  0.13973  normal 
 
 
-
 
NC_007802  Jann_2374  short-chain dehydrogenase/reductase SDR  50 
 
 
251 aa  239  5e-62  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3587  short-chain dehydrogenase/reductase SDR  50.2 
 
 
255 aa  235  5.0000000000000005e-61  Chelativorans sp. BNC1  Bacteria  normal  0.435673  n/a   
 
 
-
 
NC_008752  Aave_2258  short-chain dehydrogenase/reductase SDR  51.15 
 
 
271 aa  233  2.0000000000000002e-60  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0225727  hitchhiker  0.000000282328 
 
 
-
 
NC_008043  TM1040_3488  short-chain dehydrogenase/reductase SDR  50.41 
 
 
256 aa  229  3e-59  Ruegeria sp. TM1040  Bacteria  normal  normal  0.742718 
 
 
-
 
NC_007802  Jann_3834  short-chain dehydrogenase/reductase SDR  46.18 
 
 
256 aa  227  1e-58  Jannaschia sp. CCS1  Bacteria  normal  0.140905  normal 
 
 
-
 
NC_007493  RSP_1369  Short-chain dehydrogenase/reductase SDR  50.2 
 
 
260 aa  223  2e-57  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0037  short-chain dehydrogenase/reductase SDR  50.61 
 
 
260 aa  223  2e-57  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1243  short-chain dehydrogenase/reductase SDR  49.8 
 
 
258 aa  218  6e-56  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.455666  normal  0.236793 
 
 
-
 
NC_008786  Veis_0941  short-chain dehydrogenase/reductase SDR  49.8 
 
 
251 aa  217  2e-55  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.995863 
 
 
-
 
NC_009654  Mmwyl1_0516  short-chain dehydrogenase/reductase SDR  45.16 
 
 
254 aa  214  1.9999999999999998e-54  Marinomonas sp. MWYL1  Bacteria  normal  0.098133  normal 
 
 
-
 
NC_009428  Rsph17025_0027  short-chain dehydrogenase/reductase SDR  49.22 
 
 
288 aa  213  1.9999999999999998e-54  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
BN001304  ANIA_07128  conserved hypothetical protein  42.26 
 
 
275 aa  209  4e-53  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00131023  normal  0.0770254 
 
 
-
 
NC_010338  Caul_4001  short-chain dehydrogenase/reductase SDR  47.39 
 
 
259 aa  209  4e-53  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_3529  short-chain dehydrogenase/reductase SDR  45.02 
 
 
270 aa  208  6e-53  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0438  short-chain dehydrogenase/reductase SDR  46.99 
 
 
256 aa  208  7e-53  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.285603 
 
 
-
 
NC_012850  Rleg_0546  short-chain dehydrogenase/reductase SDR  48.59 
 
 
257 aa  199  5e-50  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0503  short-chain dehydrogenase/reductase SDR  48.19 
 
 
253 aa  196  4.0000000000000005e-49  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1729  D-xylose dehydrogenase  47.79 
 
 
245 aa  192  4e-48  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.380531  n/a   
 
 
-
 
NC_010506  Swoo_3666  short-chain dehydrogenase/reductase SDR  39.75 
 
 
255 aa  174  9e-43  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00136979  normal 
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  35.97 
 
 
254 aa  147  2.0000000000000003e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_012918  GM21_2843  short-chain dehydrogenase/reductase SDR  35.83 
 
 
255 aa  142  4e-33  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_3851  short-chain dehydrogenase/reductase SDR  37.55 
 
 
256 aa  141  9.999999999999999e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.575902  normal  0.466968 
 
 
-
 
NC_010676  Bphyt_6140  short-chain dehydrogenase/reductase SDR  39.44 
 
 
254 aa  137  2e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.601598  normal 
 
 
-
 
NC_009901  Spea_2148  short-chain dehydrogenase/reductase SDR  34.66 
 
 
247 aa  137  3.0000000000000003e-31  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007488  RSP_3963  Short-chain dehydrogenase/reductase SDR  36.59 
 
 
251 aa  136  4e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.680971  n/a   
 
 
-
 
NC_010003  Pmob_0729  short-chain dehydrogenase/reductase SDR  31.97 
 
 
251 aa  135  6.0000000000000005e-31  Petrotoga mobilis SJ95  Bacteria  normal  0.0262547  n/a   
 
 
-
 
NC_007794  Saro_0512  short-chain dehydrogenase/reductase SDR  37.75 
 
 
248 aa  135  6.0000000000000005e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1173  short-chain dehydrogenase/reductase SDR  30.47 
 
 
256 aa  135  9e-31  Clostridium cellulolyticum H10  Bacteria  normal  0.0283651  n/a   
 
 
-
 
NC_010505  Mrad2831_3001  short-chain dehydrogenase/reductase SDR  40.41 
 
 
249 aa  135  9e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1760  short-chain dehydrogenase/reductase SDR  33.6 
 
 
250 aa  134  9.999999999999999e-31  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.141854 
 
 
-
 
NC_012793  GWCH70_1779  short-chain dehydrogenase/reductase SDR  35.32 
 
 
254 aa  134  9.999999999999999e-31  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1429  short-chain dehydrogenase/reductase SDR  33.99 
 
 
256 aa  134  1.9999999999999998e-30  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3357  short-chain dehydrogenase/reductase SDR  37.89 
 
 
253 aa  134  1.9999999999999998e-30  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00078495  n/a   
 
 
-
 
NC_008687  Pden_3580  short-chain dehydrogenase/reductase SDR  37.4 
 
 
252 aa  134  1.9999999999999998e-30  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2046  short-chain dehydrogenase/reductase SDR  37.14 
 
 
263 aa  132  6e-30  Acidovorax sp. JS42  Bacteria  decreased coverage  0.00404736  normal 
 
 
-
 
NC_007950  Bpro_5564  short-chain dehydrogenase/reductase SDR  35.27 
 
 
250 aa  132  6e-30  Polaromonas sp. JS666  Bacteria  normal  0.0387947  normal 
 
 
-
 
NC_013205  Aaci_0156  short-chain dehydrogenase/reductase SDR  35.48 
 
 
253 aa  132  6.999999999999999e-30  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000282185  n/a   
 
 
-
 
NC_011898  Ccel_2089  short-chain dehydrogenase/reductase SDR  34.57 
 
 
246 aa  131  1.0000000000000001e-29  Clostridium cellulolyticum H10  Bacteria  normal  0.0163129  n/a   
 
 
-
 
NC_010505  Mrad2831_0062  short-chain dehydrogenase/reductase SDR  39.27 
 
 
255 aa  131  1.0000000000000001e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.710312  normal 
 
 
-
 
NC_007517  Gmet_2249  Short-chain dehydrogenase/reductase SDR  34.36 
 
 
260 aa  130  2.0000000000000002e-29  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000000113674  decreased coverage  1.89116e-19 
 
 
-
 
NC_010338  Caul_4827  short-chain dehydrogenase/reductase SDR  37.8 
 
 
295 aa  130  2.0000000000000002e-29  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2746  short-chain dehydrogenase/reductase SDR  39.43 
 
 
249 aa  130  2.0000000000000002e-29  Methylobacterium sp. 4-46  Bacteria  normal  0.458004  normal  0.197887 
 
 
-
 
NC_007963  Csal_1022  short chain dehydrogenase  33.73 
 
 
261 aa  130  2.0000000000000002e-29  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.917277  n/a   
 
 
-
 
NC_011992  Dtpsy_1869  short-chain dehydrogenase/reductase SDR  36.73 
 
 
263 aa  130  2.0000000000000002e-29  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2100  short-chain dehydrogenase/reductase SDR  33.61 
 
 
250 aa  130  3e-29  Acidovorax sp. JS42  Bacteria  normal  0.0527344  normal 
 
 
-
 
NC_007650  BTH_II1500  short chain dehydrogenase  36.84 
 
 
256 aa  130  3e-29  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2966  short-chain dehydrogenase/reductase SDR  35.43 
 
 
260 aa  130  3e-29  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1308  short chain dehydrogenase  35.63 
 
 
256 aa  129  4.0000000000000003e-29  Burkholderia pseudomallei 668  Bacteria  normal  0.480054  n/a   
 
 
-
 
NC_009955  Dshi_3712  short-chain dehydrogenase/reductase SDR  34.94 
 
 
252 aa  129  5.0000000000000004e-29  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA1335  short chain dehydrogenase  35.63 
 
 
256 aa  127  1.0000000000000001e-28  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3399  short-chain dehydrogenase/reductase SDR  37.84 
 
 
251 aa  128  1.0000000000000001e-28  Mycobacterium sp. JLS  Bacteria  normal  0.265476  normal  0.579067 
 
 
-
 
NC_009079  BMA10247_A0973  short chain dehydrogenase  35.63 
 
 
256 aa  127  1.0000000000000001e-28  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0318  short chain dehydrogenase  35.63 
 
 
256 aa  127  1.0000000000000001e-28  Burkholderia mallei SAVP1  Bacteria  normal  0.594764  n/a   
 
 
-
 
NC_008705  Mkms_3451  short-chain dehydrogenase/reductase SDR  37.84 
 
 
251 aa  128  1.0000000000000001e-28  Mycobacterium sp. KMS  Bacteria  normal  0.282866  normal  0.301564 
 
 
-
 
NC_008835  BMA10229_0594  short chain dehydrogenase  35.63 
 
 
256 aa  127  1.0000000000000001e-28  Burkholderia mallei NCTC 10229  Bacteria  normal  0.512344  n/a   
 
 
-
 
NC_008146  Mmcs_3389  short-chain dehydrogenase/reductase SDR  37.84 
 
 
251 aa  128  1.0000000000000001e-28  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1235  short chain dehydrogenase  35.63 
 
 
256 aa  127  1.0000000000000001e-28  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2921  dehydrogenase  36.51 
 
 
261 aa  127  2.0000000000000002e-28  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.932836 
 
 
-
 
NC_007435  BURPS1710b_A2495  short chain dehydrogenase  35.63 
 
 
256 aa  127  2.0000000000000002e-28  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2271  short-chain dehydrogenase/reductase SDR  34.65 
 
 
257 aa  127  2.0000000000000002e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6360  short chain dehydrogenase  36.65 
 
 
262 aa  127  2.0000000000000002e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_6772  short chain dehydrogenase  37.05 
 
 
262 aa  127  3e-28  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.646299 
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  34.01 
 
 
258 aa  127  3e-28  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>