More than 300 homologs were found in PanDaTox collection
for query gene Sputcn32_2061 on replicon NC_009438
Organism: Shewanella putrefaciens CN-32



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009438  Sputcn32_2061  short-chain dehydrogenase/reductase SDR  100 
 
 
256 aa  535  1e-151  Shewanella putrefaciens CN-32  Bacteria  normal  0.138185  n/a   
 
 
-
 
NC_011663  Sbal223_2145  short-chain dehydrogenase/reductase SDR  89.06 
 
 
256 aa  491  9.999999999999999e-139  Shewanella baltica OS223  Bacteria  normal  0.0597739  normal  0.690345 
 
 
-
 
NC_008321  Shewmr4_1984  short-chain dehydrogenase/reductase SDR  87.11 
 
 
256 aa  478  1e-134  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00682949  normal  0.0302653 
 
 
-
 
NC_008577  Shewana3_2071  short-chain dehydrogenase/reductase SDR  87.11 
 
 
256 aa  475  1e-133  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00640028  hitchhiker  0.00000248708 
 
 
-
 
NC_008322  Shewmr7_1990  short-chain dehydrogenase/reductase SDR  86.72 
 
 
256 aa  473  1e-132  Shewanella sp. MR-7  Bacteria  normal  0.0224708  unclonable  0.0000202886 
 
 
-
 
NC_007912  Sde_0761  putative oxidoreductase  58.2 
 
 
255 aa  315  4e-85  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.429001 
 
 
-
 
NC_007912  Sde_0771  GntR family transcriptional regulator  59.77 
 
 
256 aa  315  5e-85  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00515913  normal  0.0552536 
 
 
-
 
NC_007908  Rfer_0433  short-chain dehydrogenase/reductase SDR  51.56 
 
 
254 aa  270  2e-71  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0525  short-chain dehydrogenase/reductase SDR  50.79 
 
 
271 aa  256  3e-67  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_5073  short-chain dehydrogenase/reductase SDR  52 
 
 
261 aa  256  4e-67  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1041  short-chain dehydrogenase/reductase SDR  49.61 
 
 
258 aa  255  4e-67  Variovorax paradoxus S110  Bacteria  normal  0.208357  n/a   
 
 
-
 
NC_006348  BMA2483  short chain dehydrogenase/reductase family oxidoreductase  50 
 
 
268 aa  251  8.000000000000001e-66  Burkholderia mallei ATCC 23344  Bacteria  normal  0.709099  n/a   
 
 
-
 
NC_007434  BURPS1710b_3480  short chain dehydrogenase/reductase family oxidoreductase  50 
 
 
268 aa  251  8.000000000000001e-66  Burkholderia pseudomallei 1710b  Bacteria  normal  0.538943  n/a   
 
 
-
 
NC_009074  BURPS668_3445  NAD dependent epimerase/dehydratase family protein  50 
 
 
268 aa  251  8.000000000000001e-66  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1182  short chain dehydrogenase/reductase family oxidoreductase  50.4 
 
 
271 aa  251  8.000000000000001e-66  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3483  NAD dependent epimerase/dehydratase family protein  50 
 
 
271 aa  251  8.000000000000001e-66  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1263  short chain dehydrogenase/reductase family oxidoreductase  50 
 
 
268 aa  251  8.000000000000001e-66  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3302  short chain dehydrogenase/reductase family oxidoreductase  50 
 
 
268 aa  251  8.000000000000001e-66  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0403  short chain dehydrogenase/reductase family oxidoreductase  50 
 
 
268 aa  251  8.000000000000001e-66  Burkholderia mallei SAVP1  Bacteria  normal  0.253369  n/a   
 
 
-
 
NC_010084  Bmul_2761  short-chain dehydrogenase/reductase SDR  50.4 
 
 
264 aa  251  9.000000000000001e-66  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.386853 
 
 
-
 
NC_007951  Bxe_A0549  putative short-chain dehydrogenase/reductase, FabG-like  50.8 
 
 
266 aa  251  1e-65  Burkholderia xenovorans LB400  Bacteria  normal  0.204322  normal  0.437639 
 
 
-
 
NC_007510  Bcep18194_A3706  Short-chain dehydrogenase/reductase SDR  50.8 
 
 
268 aa  249  3e-65  Burkholderia sp. 383  Bacteria  normal  0.283086  normal  0.654023 
 
 
-
 
NC_010551  BamMC406_0549  short-chain dehydrogenase/reductase SDR  50 
 
 
270 aa  248  7e-65  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.00753595  normal  0.67708 
 
 
-
 
NC_009654  Mmwyl1_4106  short-chain dehydrogenase/reductase SDR  47.83 
 
 
256 aa  245  4.9999999999999997e-64  Marinomonas sp. MWYL1  Bacteria  normal  decreased coverage  0.00000000241543 
 
 
-
 
NC_010681  Bphyt_3408  short-chain dehydrogenase/reductase SDR  49.2 
 
 
266 aa  243  9.999999999999999e-64  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0359384  normal  0.0764099 
 
 
-
 
NC_010508  Bcenmc03_0592  short-chain dehydrogenase/reductase SDR  50 
 
 
271 aa  242  3.9999999999999997e-63  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0410788 
 
 
-
 
NC_008060  Bcen_0141  short-chain dehydrogenase/reductase SDR  50 
 
 
271 aa  242  3.9999999999999997e-63  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2612  short-chain dehydrogenase/reductase SDR  50.4 
 
 
266 aa  242  3.9999999999999997e-63  Burkholderia phymatum STM815  Bacteria  normal  normal  0.227086 
 
 
-
 
NC_008542  Bcen2424_0624  short-chain dehydrogenase/reductase SDR  50 
 
 
271 aa  242  3.9999999999999997e-63  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0853252  n/a   
 
 
-
 
NC_008786  Veis_0735  short-chain dehydrogenase/reductase SDR  49.8 
 
 
270 aa  242  5e-63  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.304096  normal 
 
 
-
 
NC_009484  Acry_2599  short-chain dehydrogenase/reductase SDR  47.6 
 
 
257 aa  241  7e-63  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2258  short-chain dehydrogenase/reductase SDR  48.61 
 
 
271 aa  241  1e-62  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0225727  hitchhiker  0.000000282328 
 
 
-
 
NC_009654  Mmwyl1_0516  short-chain dehydrogenase/reductase SDR  48.02 
 
 
254 aa  238  6.999999999999999e-62  Marinomonas sp. MWYL1  Bacteria  normal  0.098133  normal 
 
 
-
 
NC_007802  Jann_2374  short-chain dehydrogenase/reductase SDR  45.82 
 
 
251 aa  230  2e-59  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_51440  Short-chain dehydrogenase/reductase (SDR) family protein  48.4 
 
 
260 aa  229  4e-59  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3587  short-chain dehydrogenase/reductase SDR  46.09 
 
 
255 aa  227  1e-58  Chelativorans sp. BNC1  Bacteria  normal  0.435673  n/a   
 
 
-
 
NC_011365  Gdia_0389  short-chain dehydrogenase/reductase SDR  45.02 
 
 
261 aa  224  1e-57  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.132836  normal  0.554145 
 
 
-
 
NC_010505  Mrad2831_5401  short-chain dehydrogenase/reductase SDR  44 
 
 
258 aa  222  4e-57  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C1363  D-xylose dehydrogenase  44.58 
 
 
268 aa  222  4.9999999999999996e-57  Burkholderia xenovorans LB400  Bacteria  normal  0.879722  normal  0.999685 
 
 
-
 
NC_008786  Veis_0941  short-chain dehydrogenase/reductase SDR  45.78 
 
 
251 aa  221  8e-57  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.995863 
 
 
-
 
NC_007963  Csal_1729  D-xylose dehydrogenase  48.8 
 
 
245 aa  218  6e-56  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.380531  n/a   
 
 
-
 
NC_010678  Rpic_4077  short-chain dehydrogenase/reductase SDR  48.19 
 
 
255 aa  217  1e-55  Ralstonia pickettii 12J  Bacteria  normal  0.13973  normal 
 
 
-
 
NC_012857  Rpic12D_4189  short-chain dehydrogenase/reductase SDR  48.19 
 
 
255 aa  217  1e-55  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3488  short-chain dehydrogenase/reductase SDR  43.55 
 
 
256 aa  213  2.9999999999999995e-54  Ruegeria sp. TM1040  Bacteria  normal  normal  0.742718 
 
 
-
 
NC_007493  RSP_1369  Short-chain dehydrogenase/reductase SDR  45.2 
 
 
260 aa  208  7e-53  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0037  short-chain dehydrogenase/reductase SDR  44.8 
 
 
260 aa  207  1e-52  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3834  short-chain dehydrogenase/reductase SDR  41.73 
 
 
256 aa  206  3e-52  Jannaschia sp. CCS1  Bacteria  normal  0.140905  normal 
 
 
-
 
NC_009952  Dshi_1243  short-chain dehydrogenase/reductase SDR  45.04 
 
 
258 aa  205  6e-52  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.455666  normal  0.236793 
 
 
-
 
NC_010506  Swoo_3666  short-chain dehydrogenase/reductase SDR  38.67 
 
 
255 aa  197  1.0000000000000001e-49  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00136979  normal 
 
 
-
 
NC_009428  Rsph17025_0027  short-chain dehydrogenase/reductase SDR  45.45 
 
 
288 aa  196  3e-49  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4001  short-chain dehydrogenase/reductase SDR  42.17 
 
 
259 aa  191  7e-48  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0438  short-chain dehydrogenase/reductase SDR  39.84 
 
 
256 aa  190  2e-47  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.285603 
 
 
-
 
NC_012850  Rleg_0546  short-chain dehydrogenase/reductase SDR  42.35 
 
 
257 aa  181  9.000000000000001e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
BN001304  ANIA_07128  conserved hypothetical protein  37.12 
 
 
275 aa  177  1e-43  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00131023  normal  0.0770254 
 
 
-
 
NC_008228  Patl_3529  short-chain dehydrogenase/reductase SDR  39.11 
 
 
270 aa  176  4e-43  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0503  short-chain dehydrogenase/reductase SDR  41.37 
 
 
253 aa  175  5e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2271  short-chain dehydrogenase/reductase SDR  34.39 
 
 
257 aa  140  1.9999999999999998e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  33.07 
 
 
254 aa  139  3e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_013730  Slin_1373  3-oxoacyl-(acyl-carrier-protein) reductase  34.01 
 
 
248 aa  139  6e-32  Spirosoma linguale DSM 74  Bacteria  normal  0.124306  normal 
 
 
-
 
NC_012034  Athe_0213  short-chain dehydrogenase/reductase SDR  33.73 
 
 
264 aa  138  1e-31  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1783  3-ketoacyl-(acyl-carrier-protein) reductase  33.47 
 
 
255 aa  137  2e-31  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000332127  n/a   
 
 
-
 
NC_010676  Bphyt_7060  short chain dehydrogenase  29.6 
 
 
255 aa  137  2e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.556367 
 
 
-
 
NC_010003  Pmob_0729  short-chain dehydrogenase/reductase SDR  31.71 
 
 
251 aa  137  2e-31  Petrotoga mobilis SJ95  Bacteria  normal  0.0262547  n/a   
 
 
-
 
NC_007952  Bxe_B0176  short chain dehydrogenase  29.6 
 
 
255 aa  137  2e-31  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_0994  3-oxoacyl-(acyl-carrier-protein) reductase  32.8 
 
 
248 aa  135  4e-31  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.931337 
 
 
-
 
NC_011898  Ccel_1173  short-chain dehydrogenase/reductase SDR  33.6 
 
 
256 aa  135  9e-31  Clostridium cellulolyticum H10  Bacteria  normal  0.0283651  n/a   
 
 
-
 
NC_010003  Pmob_1033  short-chain dehydrogenase/reductase SDR  31.17 
 
 
248 aa  133  1.9999999999999998e-30  Petrotoga mobilis SJ95  Bacteria  normal  0.348466  n/a   
 
 
-
 
NC_009901  Spea_2148  short-chain dehydrogenase/reductase SDR  32.79 
 
 
247 aa  134  1.9999999999999998e-30  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1779  short-chain dehydrogenase/reductase SDR  33.47 
 
 
249 aa  132  3.9999999999999996e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013510  Tcur_3357  short-chain dehydrogenase/reductase SDR  33.2 
 
 
253 aa  132  3.9999999999999996e-30  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00078495  n/a   
 
 
-
 
NC_013159  Svir_22780  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  33.2 
 
 
251 aa  132  5e-30  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.503497 
 
 
-
 
NC_008148  Rxyl_0541  short-chain dehydrogenase/reductase SDR  31.76 
 
 
251 aa  132  5e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3667  short-chain dehydrogenase/reductase SDR  33.06 
 
 
259 aa  132  7.999999999999999e-30  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0268  short-chain dehydrogenase/reductase SDR  31.89 
 
 
250 aa  130  2.0000000000000002e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007953  Bxe_C0357  putative short-chain dehydrogenase  34.26 
 
 
246 aa  130  2.0000000000000002e-29  Burkholderia xenovorans LB400  Bacteria  normal  0.0963856  hitchhiker  0.00000797271 
 
 
-
 
NC_013061  Phep_0695  3-oxoacyl-(acyl-carrier-protein) reductase  32.39 
 
 
247 aa  130  2.0000000000000002e-29  Pedobacter heparinus DSM 2366  Bacteria  normal  0.825403  normal 
 
 
-
 
NC_009718  Fnod_0313  3-oxoacyl-(acyl-carrier-protein) reductase  33.33 
 
 
239 aa  130  3e-29  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.00087118  n/a   
 
 
-
 
NC_012669  Bcav_1453  short-chain dehydrogenase/reductase SDR  31.35 
 
 
252 aa  129  5.0000000000000004e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.950748  normal 
 
 
-
 
NC_012918  GM21_2843  short-chain dehydrogenase/reductase SDR  32.81 
 
 
255 aa  129  5.0000000000000004e-29  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_0630  3-oxoacyl-(acyl-carrier-protein) reductase  31.84 
 
 
246 aa  128  8.000000000000001e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6140  short-chain dehydrogenase/reductase SDR  33.73 
 
 
254 aa  128  8.000000000000001e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  0.601598  normal 
 
 
-
 
NC_010830  Aasi_0105  3-oxoacyl-(acyl-carrier-protein) reductase  32.79 
 
 
248 aa  127  1.0000000000000001e-28  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
-
 
NC_007511  Bcep18194_B1106  short chain dehydrogenase  29.6 
 
 
256 aa  128  1.0000000000000001e-28  Burkholderia sp. 383  Bacteria  normal  0.179926  normal  0.355646 
 
 
-
 
NC_009486  Tpet_1020  3-oxoacyl-(acyl-carrier-protein) reductase  31.98 
 
 
246 aa  127  1.0000000000000001e-28  Thermotoga petrophila RKU-1  Bacteria  normal  0.0122832  n/a   
 
 
-
 
NC_007948  Bpro_3692  short chain dehydrogenase  29.07 
 
 
256 aa  128  1.0000000000000001e-28  Polaromonas sp. JS666  Bacteria  normal  0.31077  normal  0.893626 
 
 
-
 
NC_010515  Bcenmc03_5592  short chain dehydrogenase  29.07 
 
 
256 aa  127  1.0000000000000001e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0383111 
 
 
-
 
NC_007963  Csal_1022  short chain dehydrogenase  30.47 
 
 
261 aa  127  1.0000000000000001e-28  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.917277  n/a   
 
 
-
 
NC_008061  Bcen_3659  short chain dehydrogenase  29.07 
 
 
256 aa  127  1.0000000000000001e-28  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.821403  n/a   
 
 
-
 
NC_008391  Bamb_4102  short chain dehydrogenase  30.28 
 
 
256 aa  128  1.0000000000000001e-28  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.188504 
 
 
-
 
NC_008543  Bcen2424_4708  short chain dehydrogenase  29.07 
 
 
256 aa  127  1.0000000000000001e-28  Burkholderia cenocepacia HI2424  Bacteria  normal  0.978516  normal  0.14883 
 
 
-
 
NC_010552  BamMC406_4567  short chain dehydrogenase  30.28 
 
 
256 aa  127  1.0000000000000001e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  0.16205  hitchhiker  0.000267636 
 
 
-
 
NC_007511  Bcep18194_B0563  Short-chain dehydrogenase/reductase SDR  30.92 
 
 
252 aa  127  2.0000000000000002e-28  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1500  short chain dehydrogenase  29.46 
 
 
256 aa  127  2.0000000000000002e-28  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0638  sorbitol dehydrogenase  33.08 
 
 
261 aa  127  2.0000000000000002e-28  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.122771  n/a   
 
 
-
 
NC_009955  Dshi_3712  short-chain dehydrogenase/reductase SDR  30.31 
 
 
252 aa  127  2.0000000000000002e-28  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1990  short-chain dehydrogenase/reductase SDR  30.16 
 
 
249 aa  127  2.0000000000000002e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_1503  3-oxoacyl-(acyl-carrier-protein) reductase  31.98 
 
 
248 aa  127  2.0000000000000002e-28  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1110  3-oxoacyl-(acyl-carrier-protein) reductase  31.98 
 
 
246 aa  126  3e-28  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0517  3-oxoacyl-(acyl-carrier-protein) reductase  30.12 
 
 
247 aa  126  3e-28  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  31.45 
 
 
258 aa  126  3e-28  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
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