Gene Athe_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0213 
Symbol 
ID7407204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp259821 
End bp260615 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content40% 
IMG OID643714614 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002572137 
Protein GI222528255 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGAATT CACCTTTTCT TTCGATAGCC GAGTTTGAAG GCAAAAATGT GGTTATAACT 
GGTGCTGCCC AGGGAATTGG TCTTGTCACA GCACTCTCTT TTCTTGAAAA TGGTGCAACC
GTTTTTGCCA TTGACAATGA CAGAGAAGCA ATTGAAGATG CTCTGCAGGA CTTTTTTGAT
AAGTTCAAAG ACAGGATAAC CTTTTTTGAG TGTGACTTAG CAAGCGCAAA AGAACTTGAG
CTTGTCTGCC ATAAGATTGG TGAAAAAGCT GGGAAAATAG ACGTTCTTGT CAACAATGCA
GCTATATCTT CAACAAAGTG GATTGAAAAT AGAAGCGTTG ATGAGTGGGA TGAAGTGATA
AATGTTAACT TGAGAGCACC ATACTTAATG GTAAAATTTC TCCTGCCGTA TTTAAAAGAG
GGTGCATCTA TTGTCAACAT AGCATCAACA AGAGCTTTGA TGTCAGAGCC AAATACAGAA
CCGTATTCAG CGTCAAAAGG TGGTATACTT GCACTTACAC ACTCTTTAGC AGTGTCACTT
TCACACAAAA AAATAAGAGT AAATGCGATA AGTCCCGGTT GGATAGAAAC ATCAAAGTAC
AAAAAAAGAA AATATCGTCG TGAACCTGAG CTCAGAAGCA TTGATCATCT TCAGCATCCG
GCAGGAAGGG TGGGTATGCC CGAAGACATT GCAAACGCCA TTTTGTTTTT GTCATCTGAG
AAAAGCTCAT TTATTACAGG CACAAATCTA ATTGTTGACG GTGGAATGAC AGTTAAGATG
ATTTATGAGG AGTAA
 
Protein sequence
MGNSPFLSIA EFEGKNVVIT GAAQGIGLVT ALSFLENGAT VFAIDNDREA IEDALQDFFD 
KFKDRITFFE CDLASAKELE LVCHKIGEKA GKIDVLVNNA AISSTKWIEN RSVDEWDEVI
NVNLRAPYLM VKFLLPYLKE GASIVNIAST RALMSEPNTE PYSASKGGIL ALTHSLAVSL
SHKKIRVNAI SPGWIETSKY KKRKYRREPE LRSIDHLQHP AGRVGMPEDI ANAILFLSSE
KSSFITGTNL IVDGGMTVKM IYEE