| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0438 |
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| Symbol | |
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| ID | 5321272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 474643 |
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| End bp | 475413 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789373 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001326130 |
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| Protein GI | 150395663 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.285603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTGC CGAGCAGCCA GTTTCCTGAC CTGCGCAATC GCGGGGTTTT GATCACCGGC
GGCGGTTCCG GCATAGGGTC CGCTCTGGTG GAGGCGTTCG CCCGGCAAGG CTGCCGTGTC
GCCATCGTCG ACATCGCAGC GGAGCCCAGC CGAGCGCTCT GCGAAAAAGT CGCGGCGCAA
ACCGGGCAGG CTCCACACTT CATCCAGGCA GACCTTCGTC AGGTCGATGC GGTACGCGCC
GCGGCCGACG AGGCTCTCGC CGGACTCGGC TCTGTCGATA TTCTCGTCAA CAACGCCGCG
CGGGATGACC GGCAGGCGCT CGAAGCCGTG ACGGAGGAAA GCTGGGACGA AAGTCTTTCC
GTGAACCTGC GACATCTCTT TTTCATGTGC CAGGCGATCG CGCCCCACAT GCGGCGACAG
GGCGGAGGAT CAATCATCAA TTTCTCGTCG ATCGCCTTCA TGCTCAACAT GCCTGATATT
CCCGCCTATT CTACCGCCAA AGCCGGGATC GTCGGCCTCA CCAAATCGCT CGCGGGGAAG
CTCGGACCGG ATAATATCCG CGTCAACGCG GTCCTGCCCG GCATGATCGT CACGGAGAGG
CAGCGGCGCC TGTGGCTCAC GGAAGAATCA ATCGCACGGA TGCAGGAGAG ACAGTGCCTC
AAGCGCATGC TGGTCGCCGA GGATCTCGTC GGACCCTGCC TGTTCCTGGC TTCGGACTGT
TCGGCGGCGA TGACCGCACA GACCATGATC ATCGATGGAG GCGTATTTTG A
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| Protein sequence | MTLPSSQFPD LRNRGVLITG GGSGIGSALV EAFARQGCRV AIVDIAAEPS RALCEKVAAQ
TGQAPHFIQA DLRQVDAVRA AADEALAGLG SVDILVNNAA RDDRQALEAV TEESWDESLS
VNLRHLFFMC QAIAPHMRRQ GGGSIINFSS IAFMLNMPDI PAYSTAKAGI VGLTKSLAGK
LGPDNIRVNA VLPGMIVTER QRRLWLTEES IARMQERQCL KRMLVAEDLV GPCLFLASDC
SAAMTAQTMI IDGGVF
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