| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0541 |
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| Symbol | |
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| ID | 4116157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 570142 |
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| End bp | 570897 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638035329 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_643327 |
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| Protein GI | 108803390 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCTGG AAGGCAAGGT CTGCGTAGTG ACCGGGGGTG CCACCGGCAT CGGTGAGGCC
TCCGCCCTCG CTCTGGCCCG TGAGGGGGCC AGGGTCGTCG TCGGCGACGT AAACGTCGAG
GAGGGGCGCA AGACCGTAGA GGACATAAAG AAGGAGGGCG GCGAGGCCCT CTTCGTCGAG
TGCGACGTTT CCAGAGAGGA GGGCGCCCGG CGGCTCGTGG AGGAGACCGT CGGCGCGTTC
GGCAGGATCG ACGTGCTCTT CAACAACGCC GGCATCAACA TCACCGAGGG CAGCGTCCCC
GAGATGAAGG TCGAGGACTG GCGCAGGACC TTCGCGGTCA ACGTGGACGG CATCTTCTGG
TGCAGCCGGT ACGCCATCCC CGAGATGCGC AAGAACGGTG GCGGCAGGAT CATCAACACC
GCCTCCCCCA GCTCCTTCGT CGGCTGGGCC GGCAACGCCG CCTACATAGC CTCCAAGGGG
GCCGTCATGT CCCTGACCCG GGCCATGGCC ATGGACCACG CGAAGGAGAA CATCCGGGTC
AACGCCATCG TGCCGGGTCT GATCCTGAGC CCCCTCGGCC TCAACTGGGT CCAGCAGCAG
GAGGACCCCG AGGCCGTCAA GGAGAGCATC CACCCCATCG GCCGGCCCGG TTACCCGGAG
GACGTGGCCC CGGTGGTGGT GTTCCTGGCC CAGGACGACG CGGAGTTCGC CACCGGCGCC
CCGTTCTTCA TGGACGGCGG GCTGGTGGCC AGCTAG
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| Protein sequence | MRLEGKVCVV TGGATGIGEA SALALAREGA RVVVGDVNVE EGRKTVEDIK KEGGEALFVE
CDVSREEGAR RLVEETVGAF GRIDVLFNNA GINITEGSVP EMKVEDWRRT FAVNVDGIFW
CSRYAIPEMR KNGGGRIINT ASPSSFVGWA GNAAYIASKG AVMSLTRAMA MDHAKENIRV
NAIVPGLILS PLGLNWVQQQ EDPEAVKESI HPIGRPGYPE DVAPVVVFLA QDDAEFATGA
PFFMDGGLVA S
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