| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0592 |
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| Symbol | |
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| ID | 6122273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 649556 |
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| End bp | 650371 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641637155 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001763892 |
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| Protein GI | 170731945 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0410788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG ATACTTCCGC GCCTGACTCG CAGGCTACGC ACGCTGCGAG CGACGCGCGT
TTCGCGCGCT ACCCGAGCCT CGAGGATCGC GCGGTGCTGA TCACGGGCGG CGCGACCGGC
ATCGGCGCGT CGTTCGTCGA GCACTTCGCC GAACAGGGGG CGCGCGTCGC GTTCGTCGAC
CTCGATGCGG CGGCCGGCGC CGCGCTCGCC GAACGCCTCG CGCACGTACG CCATGCGCCG
CTGTTTCTCT CGTGCGACCT GACCGACATC GATGCGCTGC GCCATGCGAT CGATGCGATC
CGCGCGCGCA TCGGCGCGAT CGCGGTACTC GTGAACAACG CGGCGAACGA CGCGCGCCAC
GCGATCGGCG ACGTGACGCC CGCGTCGTTC GACGCGGGCA TCGCGGTGAA CCTGCGTCAC
CAGTTCTTTG CCGCGCAGGC GGTGATCGAC GACATGAAAC GGCAGGGCGG CGGCGCGATC
ATCAATCTCG GCTCGATCAG CTGGATGCTG AAGAACGGCG GCTATCCGGT CTACGTGATG
GCGAAGGCGG CCGTGCAGGG CCTGACGCGC GGCCTCGCGC GCGATCTCGG CCCGTTCGGC
ATCCGCGTGA ATTCGCTGGT GCCCGGCTGG GTGATGACCG ACAAGCAGCG CCGGCTGTGG
CTCGACGACG CGGGCCGCGC GGCGATCAAG GCCGGCCAGT GCCTCGACGC CGAACTCCTG
CCGGCCGACC TCGCCCGGAT GGCGCTGTTT CTCGCGGCCG ACGACAGCCG GATGATCACC
GCGCAGGACG TGATCGTCGA CGGCGGCTGG GCCTGA
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| Protein sequence | MTIDTSAPDS QATHAASDAR FARYPSLEDR AVLITGGATG IGASFVEHFA EQGARVAFVD
LDAAAGAALA ERLAHVRHAP LFLSCDLTDI DALRHAIDAI RARIGAIAVL VNNAANDARH
AIGDVTPASF DAGIAVNLRH QFFAAQAVID DMKRQGGGAI INLGSISWML KNGGYPVYVM
AKAAVQGLTR GLARDLGPFG IRVNSLVPGW VMTDKQRRLW LDDAGRAAIK AGQCLDAELL
PADLARMALF LAADDSRMIT AQDVIVDGGW A
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