| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0771 |
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| Symbol | |
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| ID | 3965824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 995202 |
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| End bp | 995972 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637919833 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_526245 |
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| Protein GI | 90020418 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00515913 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0552536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATTTAA CCAATCAATA CCCCAGCCTA AAGGGCAAAG TGGTTTTGAT TAGCGGCGGT
GCCTCTGGCA TTGGTGCTAA CTTGGTCGAT GCGTTTTGCC GGCAGGGCGC GACTGTCGCG
TTTATGGATA TTCTAGACGA CGCCGCTGAG TGGTTGGTTG GTCATATCGG TGCACTTAAC
GGAGTCGATC TTCCTCATTA CTATAAGTGC GATATGGTCG ATATCCCCGC ACTTCAGCGC
ACAATTGCGC AAATTCAGCA AGACTTAGGC CCAATTAACG TACTTGTCAA TAATGCCGCC
AACGATGAAC GCCACGACTT TCGCGATGTA ACCGTCGACT ATTGGGATGA GCGCATGGCG
GTAAACTTGC GTCATCACTT CTTTGCTTCG CAAGCGGTAT ACGCCGATAT GCAAAAGCTA
GGTGGTGGCT CCATTATAAA TTTGGGCTCG ATGAGCTGGT ACGCCACCCA AGGCGGTATG
CCTGCCTATA CCAGTGCTAA AGCTGCTATA GAAGGCCTAA CTCGCGGTTT GGCTCGAGAT
ATGGGGCCGG ATAACATTCG TGTGAACACT CTTGTGCCTG GCTGGGTAAT GACCAAACGT
CAATTACAAA CCTGTGTAGA CGATGCCGCG CGGCGCACTA TTCGCGAAGC GCAGTGTTTA
AAATCGATGG TAATGCCCGA AGATATCGCC GCAATGGCGC TATTTCTCGC CTCAGACGAC
AGCAAAATGT GTACATCGCA GCATTTTATT GTTGATGGGG GATGGGTGTA G
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| Protein sequence | MNLTNQYPSL KGKVVLISGG ASGIGANLVD AFCRQGATVA FMDILDDAAE WLVGHIGALN
GVDLPHYYKC DMVDIPALQR TIAQIQQDLG PINVLVNNAA NDERHDFRDV TVDYWDERMA
VNLRHHFFAS QAVYADMQKL GGGSIINLGS MSWYATQGGM PAYTSAKAAI EGLTRGLARD
MGPDNIRVNT LVPGWVMTKR QLQTCVDDAA RRTIREAQCL KSMVMPEDIA AMALFLASDD
SKMCTSQHFI VDGGWV
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