Gene Coch_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1503 
Symbol 
ID8367941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1786031 
End bp1786777 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content42% 
IMG OID644983937 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_003141610 
Protein GI256820331 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAT TAGAAGGAAA AACAGCTATT ATCACTGGTG CTAGTAGAGG CATTGGGCGT 
GGTATAGCCA AAGTATTTGC ATCCCACGGG GCAAATATTG CTTTTTCGTA CAGTTCGTCA
GTGGATGCTG CAATGGCATT AGAGAAAGAA TTAGCTACAA AAGGTGTGAA AGTAAAAGGC
TACCAAAGCG ATGCTTCTAA CTTCGCACAG TCGCAAGAAT TTGTAGATGC AGTGGTAGCG
GAATTTGGCA CAGTTGATAT TCTAGTAAAC AACGCAGGTA TCACTAAAGA CAACCTACTG
ATGCGCATCA GTGAAGAAGA TTTTGATAAG GTAATAGAAG TAAATCTCAA ATCGGTGTTT
AATATGACCA AAGCGGTACA GCGCATTATG CTTAAACAAC GTAAAGGTTC TATTATCAAT
ATGAGTAGTG TGGTGGGCGT GAAAGGCAAT GCTGGACAGT CAAACTATGC AGCTTCTAAA
GCGGGAATTA TCGGCTTTAC CAAATCGATT GCCTTAGAGT TAGGCTCTCG AAATATCCGT
TGCAATGCTA TCGCTCCAGG CTTTATAGAA ACCGAAATGA CAGCTGTACT TGACGAAAAA
GTAGTACAAG GCTGGCGTGA TGTTATCCCC CTAAAACGTG GCGGACAACC CGAAGACGTA
GCGAATGCTT GTGTGTTTTT AGCCTCTGAT ATGTCGGCTT ACATCACAGG GCAAGTGCTC
AATGTTGATG GAGGAATGCT CACATAA
 
Protein sequence
MKLLEGKTAI ITGASRGIGR GIAKVFASHG ANIAFSYSSS VDAAMALEKE LATKGVKVKG 
YQSDASNFAQ SQEFVDAVVA EFGTVDILVN NAGITKDNLL MRISEEDFDK VIEVNLKSVF
NMTKAVQRIM LKQRKGSIIN MSSVVGVKGN AGQSNYAASK AGIIGFTKSI ALELGSRNIR
CNAIAPGFIE TEMTAVLDEK VVQGWRDVIP LKRGGQPEDV ANACVFLASD MSAYITGQVL
NVDGGMLT