More than 300 homologs were found in PanDaTox collection
for query gene Aave_2258 on replicon NC_008752
Organism: Acidovorax citrulli AAC00-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008752  Aave_2258  short-chain dehydrogenase/reductase SDR  100 
 
 
271 aa  545  1e-154  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0225727  hitchhiker  0.000000282328 
 
 
-
 
NC_008786  Veis_0735  short-chain dehydrogenase/reductase SDR  75.65 
 
 
270 aa  399  9.999999999999999e-111  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.304096  normal 
 
 
-
 
NC_012791  Vapar_1041  short-chain dehydrogenase/reductase SDR  78.43 
 
 
258 aa  398  9.999999999999999e-111  Variovorax paradoxus S110  Bacteria  normal  0.208357  n/a   
 
 
-
 
NC_011663  Sbal223_2145  short-chain dehydrogenase/reductase SDR  50.4 
 
 
256 aa  275  7e-73  Shewanella baltica OS223  Bacteria  normal  0.0597739  normal  0.690345 
 
 
-
 
NC_007912  Sde_0761  putative oxidoreductase  50.6 
 
 
255 aa  273  2.0000000000000002e-72  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.429001 
 
 
-
 
NC_008321  Shewmr4_1984  short-chain dehydrogenase/reductase SDR  49.4 
 
 
256 aa  272  3e-72  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00682949  normal  0.0302653 
 
 
-
 
NC_008577  Shewana3_2071  short-chain dehydrogenase/reductase SDR  49.4 
 
 
256 aa  271  8.000000000000001e-72  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00640028  hitchhiker  0.00000248708 
 
 
-
 
NC_009438  Sputcn32_2061  short-chain dehydrogenase/reductase SDR  48.61 
 
 
256 aa  266  2e-70  Shewanella putrefaciens CN-32  Bacteria  normal  0.138185  n/a   
 
 
-
 
NC_009654  Mmwyl1_4106  short-chain dehydrogenase/reductase SDR  50.6 
 
 
256 aa  266  2e-70  Marinomonas sp. MWYL1  Bacteria  normal  decreased coverage  0.00000000241543 
 
 
-
 
NC_008322  Shewmr7_1990  short-chain dehydrogenase/reductase SDR  48.61 
 
 
256 aa  265  5.999999999999999e-70  Shewanella sp. MR-7  Bacteria  normal  0.0224708  unclonable  0.0000202886 
 
 
-
 
NC_010681  Bphyt_3408  short-chain dehydrogenase/reductase SDR  49.81 
 
 
266 aa  263  3e-69  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0359384  normal  0.0764099 
 
 
-
 
NC_007951  Bxe_A0549  putative short-chain dehydrogenase/reductase, FabG-like  50.19 
 
 
266 aa  262  4e-69  Burkholderia xenovorans LB400  Bacteria  normal  0.204322  normal  0.437639 
 
 
-
 
NC_007912  Sde_0771  GntR family transcriptional regulator  50.8 
 
 
256 aa  261  1e-68  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00515913  normal  0.0552536 
 
 
-
 
NC_007510  Bcep18194_A3706  Short-chain dehydrogenase/reductase SDR  52.82 
 
 
268 aa  260  2e-68  Burkholderia sp. 383  Bacteria  normal  0.283086  normal  0.654023 
 
 
-
 
NC_012560  Avin_51440  Short-chain dehydrogenase/reductase (SDR) family protein  53.08 
 
 
260 aa  258  6e-68  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_0389  short-chain dehydrogenase/reductase SDR  55.69 
 
 
261 aa  258  7e-68  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.132836  normal  0.554145 
 
 
-
 
NC_008836  BMA10229_A1263  short chain dehydrogenase/reductase family oxidoreductase  51.15 
 
 
268 aa  257  2e-67  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2483  short chain dehydrogenase/reductase family oxidoreductase  51.15 
 
 
268 aa  257  2e-67  Burkholderia mallei ATCC 23344  Bacteria  normal  0.709099  n/a   
 
 
-
 
NC_007434  BURPS1710b_3480  short chain dehydrogenase/reductase family oxidoreductase  51.15 
 
 
268 aa  257  2e-67  Burkholderia pseudomallei 1710b  Bacteria  normal  0.538943  n/a   
 
 
-
 
NC_009484  Acry_2599  short-chain dehydrogenase/reductase SDR  49.41 
 
 
257 aa  256  2e-67  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3445  NAD dependent epimerase/dehydratase family protein  51.15 
 
 
268 aa  257  2e-67  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3302  short chain dehydrogenase/reductase family oxidoreductase  51.15 
 
 
268 aa  257  2e-67  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0403  short chain dehydrogenase/reductase family oxidoreductase  51.15 
 
 
268 aa  257  2e-67  Burkholderia mallei SAVP1  Bacteria  normal  0.253369  n/a   
 
 
-
 
NC_009076  BURPS1106A_3483  NAD dependent epimerase/dehydratase family protein  51.15 
 
 
271 aa  256  2e-67  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2761  short-chain dehydrogenase/reductase SDR  51.21 
 
 
264 aa  252  4.0000000000000004e-66  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.386853 
 
 
-
 
NC_007651  BTH_I1182  short chain dehydrogenase/reductase family oxidoreductase  50.18 
 
 
271 aa  250  1e-65  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2612  short-chain dehydrogenase/reductase SDR  48.67 
 
 
266 aa  251  1e-65  Burkholderia phymatum STM815  Bacteria  normal  normal  0.227086 
 
 
-
 
NC_008390  Bamb_0525  short-chain dehydrogenase/reductase SDR  50.4 
 
 
271 aa  250  2e-65  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2374  short-chain dehydrogenase/reductase SDR  51.01 
 
 
251 aa  249  3e-65  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0141  short-chain dehydrogenase/reductase SDR  49.45 
 
 
271 aa  249  3e-65  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0624  short-chain dehydrogenase/reductase SDR  49.45 
 
 
271 aa  249  3e-65  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0853252  n/a   
 
 
-
 
NC_010508  Bcenmc03_0592  short-chain dehydrogenase/reductase SDR  49.45 
 
 
271 aa  249  3e-65  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0410788 
 
 
-
 
NC_012791  Vapar_5073  short-chain dehydrogenase/reductase SDR  49.81 
 
 
261 aa  244  9.999999999999999e-64  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5401  short-chain dehydrogenase/reductase SDR  51.21 
 
 
258 aa  244  9.999999999999999e-64  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0549  short-chain dehydrogenase/reductase SDR  50 
 
 
270 aa  243  3e-63  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.00753595  normal  0.67708 
 
 
-
 
NC_007953  Bxe_C1363  D-xylose dehydrogenase  48.41 
 
 
268 aa  241  1e-62  Burkholderia xenovorans LB400  Bacteria  normal  0.879722  normal  0.999685 
 
 
-
 
NC_007908  Rfer_0433  short-chain dehydrogenase/reductase SDR  46.99 
 
 
254 aa  239  4e-62  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0516  short-chain dehydrogenase/reductase SDR  46.59 
 
 
254 aa  230  1e-59  Marinomonas sp. MWYL1  Bacteria  normal  0.098133  normal 
 
 
-
 
NC_010678  Rpic_4077  short-chain dehydrogenase/reductase SDR  49.6 
 
 
255 aa  226  3e-58  Ralstonia pickettii 12J  Bacteria  normal  0.13973  normal 
 
 
-
 
NC_012857  Rpic12D_4189  short-chain dehydrogenase/reductase SDR  49.6 
 
 
255 aa  226  3e-58  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3587  short-chain dehydrogenase/reductase SDR  48.59 
 
 
255 aa  225  7e-58  Chelativorans sp. BNC1  Bacteria  normal  0.435673  n/a   
 
 
-
 
NC_008043  TM1040_3488  short-chain dehydrogenase/reductase SDR  45.87 
 
 
256 aa  218  7e-56  Ruegeria sp. TM1040  Bacteria  normal  normal  0.742718 
 
 
-
 
NC_008786  Veis_0941  short-chain dehydrogenase/reductase SDR  47.2 
 
 
251 aa  217  2e-55  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.995863 
 
 
-
 
NC_007493  RSP_1369  Short-chain dehydrogenase/reductase SDR  49.01 
 
 
260 aa  212  4.9999999999999996e-54  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0037  short-chain dehydrogenase/reductase SDR  49.41 
 
 
260 aa  212  5.999999999999999e-54  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1729  D-xylose dehydrogenase  47.41 
 
 
245 aa  209  4e-53  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.380531  n/a   
 
 
-
 
NC_010338  Caul_4001  short-chain dehydrogenase/reductase SDR  46.46 
 
 
259 aa  209  5e-53  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3834  short-chain dehydrogenase/reductase SDR  40.48 
 
 
256 aa  208  8e-53  Jannaschia sp. CCS1  Bacteria  normal  0.140905  normal 
 
 
-
 
NC_009428  Rsph17025_0027  short-chain dehydrogenase/reductase SDR  50.75 
 
 
288 aa  207  1e-52  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1243  short-chain dehydrogenase/reductase SDR  45.87 
 
 
258 aa  206  3e-52  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.455666  normal  0.236793 
 
 
-
 
NC_009636  Smed_0438  short-chain dehydrogenase/reductase SDR  48.19 
 
 
256 aa  202  7e-51  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.285603 
 
 
-
 
NC_008228  Patl_3529  short-chain dehydrogenase/reductase SDR  40.16 
 
 
270 aa  196  5.000000000000001e-49  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
BN001304  ANIA_07128  conserved hypothetical protein  38.01 
 
 
275 aa  185  6e-46  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00131023  normal  0.0770254 
 
 
-
 
NC_011369  Rleg2_0503  short-chain dehydrogenase/reductase SDR  46.15 
 
 
253 aa  182  5.0000000000000004e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0546  short-chain dehydrogenase/reductase SDR  45.34 
 
 
257 aa  180  2e-44  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3666  short-chain dehydrogenase/reductase SDR  38.21 
 
 
255 aa  177  1e-43  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00136979  normal 
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  34.39 
 
 
254 aa  128  1.0000000000000001e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_008740  Maqu_1429  short-chain dehydrogenase/reductase SDR  32.81 
 
 
256 aa  125  5e-28  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3704  short-chain dehydrogenase/reductase SDR  33.2 
 
 
257 aa  125  7e-28  Chelativorans sp. BNC1  Bacteria  normal  0.416119  n/a   
 
 
-
 
NC_010623  Bphy_5382  short chain dehydrogenase  37.9 
 
 
247 aa  125  8.000000000000001e-28  Burkholderia phymatum STM815  Bacteria  normal  0.429427  normal  0.712878 
 
 
-
 
NC_010338  Caul_4231  short-chain dehydrogenase/reductase SDR  33.86 
 
 
255 aa  124  2e-27  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010335  Caul_5136  short-chain dehydrogenase/reductase SDR  32.02 
 
 
254 aa  124  2e-27  Caulobacter sp. K31  Bacteria  normal  0.708802  normal 
 
 
-
 
NC_010338  Caul_2856  short-chain dehydrogenase/reductase SDR  33.86 
 
 
255 aa  124  2e-27  Caulobacter sp. K31  Bacteria  normal  0.423234  normal  0.0918658 
 
 
-
 
NC_012791  Vapar_5033  short chain dehydrogenase  39.06 
 
 
253 aa  123  4e-27  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0357  putative short-chain dehydrogenase  36.25 
 
 
246 aa  122  4e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.0963856  hitchhiker  0.00000797271 
 
 
-
 
NC_013501  Rmar_2450  3-oxoacyl-(acyl-carrier-protein) reductase  34.15 
 
 
249 aa  123  4e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3239  short chain dehydrogenase  32.68 
 
 
254 aa  122  5e-27  Bacillus cereus AH187  Bacteria  normal  0.304035  n/a   
 
 
-
 
NC_013744  Htur_4226  short-chain dehydrogenase/reductase SDR  34.25 
 
 
255 aa  122  5e-27  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_013526  Tter_2271  short-chain dehydrogenase/reductase SDR  32.13 
 
 
257 aa  122  6e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009955  Dshi_3712  short-chain dehydrogenase/reductase SDR  33.08 
 
 
252 aa  122  6e-27  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6883  short-chain dehydrogenase/reductase SDR  32.27 
 
 
277 aa  122  6e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1834  short-chain dehydrogenase/reductase SDR  33.47 
 
 
252 aa  120  1.9999999999999998e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3213  short chain dehydrogenase  31.64 
 
 
254 aa  120  3e-26  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007005  Psyr_1892  3-ketoacyl-(acyl-carrier-protein) reductase  35.48 
 
 
249 aa  119  3.9999999999999996e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.362841  normal  0.505401 
 
 
-
 
NC_010511  M446_2746  short-chain dehydrogenase/reductase SDR  36 
 
 
249 aa  119  4.9999999999999996e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.458004  normal  0.197887 
 
 
-
 
NC_012560  Avin_22070  short chain dehydrogenase  36.44 
 
 
252 aa  119  4.9999999999999996e-26  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_2971  short chain dehydrogenase  32.03 
 
 
257 aa  119  7e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2097  oxidoreductase, short chain dehydrogenase/reductase family  34.68 
 
 
249 aa  118  7.999999999999999e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0368454  n/a   
 
 
-
 
NC_006274  BCZK2906  short chain dehydrogenase  31.91 
 
 
257 aa  118  7.999999999999999e-26  Bacillus cereus E33L  Bacteria  normal  0.01573  n/a   
 
 
-
 
NC_010483  TRQ2_1110  3-oxoacyl-(acyl-carrier-protein) reductase  33.2 
 
 
246 aa  119  7.999999999999999e-26  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0512  short-chain dehydrogenase/reductase SDR  31.2 
 
 
248 aa  118  9e-26  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0259  short-chain dehydrogenase/reductase SDR  35.6 
 
 
249 aa  118  9.999999999999999e-26  Methylobacterium populi BJ001  Bacteria  normal  normal  0.519285 
 
 
-
 
NC_014148  Plim_3123  3-oxoacyl-(acyl-carrier-protein) reductase  34.82 
 
 
251 aa  118  9.999999999999999e-26  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0932491  n/a   
 
 
-
 
NC_008322  Shewmr7_0657  short-chain dehydrogenase/reductase SDR  30.74 
 
 
292 aa  118  9.999999999999999e-26  Shewanella sp. MR-7  Bacteria  normal  normal  0.65557 
 
 
-
 
NC_005945  BAS2979  short chain dehydrogenase  31.25 
 
 
257 aa  117  1.9999999999999998e-25  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.000000666637  n/a   
 
 
-
 
NC_007406  Nwi_2755  3-hydroxybutyrate dehydrogenase  33.59 
 
 
262 aa  117  1.9999999999999998e-25  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.137616  normal  0.463862 
 
 
-
 
NC_009486  Tpet_1020  3-oxoacyl-(acyl-carrier-protein) reductase  32.8 
 
 
246 aa  117  1.9999999999999998e-25  Thermotoga petrophila RKU-1  Bacteria  normal  0.0122832  n/a   
 
 
-
 
NC_007530  GBAA_3204  short chain dehydrogenase  31.25 
 
 
257 aa  117  1.9999999999999998e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.00024474  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2927  short chain dehydrogenase  32.3 
 
 
254 aa  117  1.9999999999999998e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2148  short-chain dehydrogenase/reductase SDR  30.04 
 
 
247 aa  117  1.9999999999999998e-25  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6140  short-chain dehydrogenase/reductase SDR  33.73 
 
 
254 aa  116  3e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  0.601598  normal 
 
 
-
 
NC_013510  Tcur_3357  short-chain dehydrogenase/reductase SDR  33.07 
 
 
253 aa  116  3e-25  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00078495  n/a   
 
 
-
 
NC_014230  CA2559_11468  acetoin(diacetyl)reductase  31.2 
 
 
254 aa  116  3.9999999999999997e-25  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0328388  n/a   
 
 
-
 
NC_012793  GWCH70_1779  short-chain dehydrogenase/reductase SDR  31.5 
 
 
254 aa  116  3.9999999999999997e-25  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10784  short chain dehydrogenase  34.82 
 
 
248 aa  116  3.9999999999999997e-25  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_010644  Emin_0659  3-oxoacyl-(acyl-carrier-protein) reductase  30.68 
 
 
245 aa  116  5e-25  Elusimicrobium minutum Pei191  Bacteria  normal  0.372694  normal 
 
 
-
 
NC_013744  Htur_3817  short-chain dehydrogenase/reductase SDR  33.06 
 
 
252 aa  115  5e-25  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.191751  n/a   
 
 
-
 
NC_009511  Swit_0293  short-chain dehydrogenase/reductase SDR  35.77 
 
 
255 aa  116  5e-25  Sphingomonas wittichii RW1  Bacteria  normal  0.678355  normal 
 
 
-
 
NC_009720  Xaut_1138  short-chain dehydrogenase/reductase SDR  36.65 
 
 
255 aa  115  6e-25  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A3195  short chain dehydrogenase  31.13 
 
 
254 aa  115  6e-25  Bacillus cereus B4264  Bacteria  normal  0.961383  n/a   
 
 
-
 
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