| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0293 |
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| Symbol | |
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| ID | 5198587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 309464 |
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| End bp | 310231 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640579833 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001260802 |
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| Protein GI | 148553220 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.678355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA ACCGCCGTTT CGAGGGCCGT TCGGTGATCG TCACCGGCGC CGGATCGGGC
ATCGGCGAGG CGACCGCGCG CGCCTTCGCC GCCGAGGGCG CGCTCGTCGC CATCGCCGAA
CTCGACGGCG ACAAGGGCCG CGCGGTGTGC GACGCGATCG TCGCCGAGGG AGGCACCGCC
CGCTTCGTCG AGACCGACGC GACCGACGAG GCGTCGGTCA GGGCGATGGT CGAGGCGGCC
TGCGCCGCGC ACGGCCCGGT GCGCCACGCC TTCAACAATG TCGGCGCGGC GAAGCTCGGT
TCGCTGGAGG AGCTGAGCCT CGACGACTGG AACTGGACGG TCGGTATCTC GCTGACCAGC
ACCTTCCTGG CGATGAAGCA CGAGATACCG GTGATGAAGG CCAATGGCGG CGGGACGATC
GTCAACACCG CCTCGATGTC GGGCCGCATC TTCACCCCCT CGGCGCCGCC CTCCTATTCG
GCCGCCAAGG CCGGGGTGAT CCATCTCAGC CATTATGCGA GCTGCACCTA TGCGGCGGAC
AATATCCGGG TGAACAGCGT GCTCCCCGGC CTCACCGCCA CGCCGCAGAT CGCGTCGATG
TTCACGCTGG AGCAGCAGGC CGAGGTCGCC AGCCACCACC AGATGATCCA CCGCTGCGTC
CAGCCCGCCG AGATCGCGGC GGCGGTGCTG TTCCTGTCGA GCGACGAGGC GGCGATGATC
ACCGGTCGCG GGATCGAGGT TTCGGGCGGC GGGGCGCACG CGTCGTAG
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| Protein sequence | MSSNRRFEGR SVIVTGAGSG IGEATARAFA AEGALVAIAE LDGDKGRAVC DAIVAEGGTA
RFVETDATDE ASVRAMVEAA CAAHGPVRHA FNNVGAAKLG SLEELSLDDW NWTVGISLTS
TFLAMKHEIP VMKANGGGTI VNTASMSGRI FTPSAPPSYS AAKAGVIHLS HYASCTYAAD
NIRVNSVLPG LTATPQIASM FTLEQQAEVA SHHQMIHRCV QPAEIAAAVL FLSSDEAAMI
TGRGIEVSGG GAHAS
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