| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2061 |
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| Symbol | |
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| ID | 5079487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2355282 |
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| End bp | 2356052 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640499223 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001183581 |
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| Protein GI | 146293157 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.138185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTAA GTAATCAATA CCCGAGCTTG AAAGGAAAAA CCATTTTTAT CAGTGGTGGC
GGTACGGGTA TTGGCGCCTG TTTAGTGAGA TCATTCTTAG AGCAGGGCGC AAAAGTTGCA
TTTGCCGACA TACTTATAAC GGAATCAAAT CAACTTGTTA GTACCTTATT AGCCAGTATG
CCCGATGCAA TAGTGAAATT TTATCCCTGT GATCTCGTGG ATATTGCAGC ACTAAAAAAC
GTCGTTACGC AGATAGAGCA GGAAATTGGA ACCATTGCGG TATTGATTAA TAACGCCGCC
TGCGATGAGC GCCATAGCAT AGATGAAGTG ACTCCTGAGT ATTGGGATCA CTGTTTAAAC
ACCAATTTAC GGCATTATTT TTTTGCAGTG CAAGCGGTAA GGCCGCAAAT GCAACGTCTG
GGTGGCGGTT CAGTGATCAA TTTAGGCTCA ATGAGTTGGC ATAATCGCCA GCCGGGTATG
GCAGGCTATA CCGCCTCTAA AGCTGGTGCT ATGGGATTGA CTCGCGGATT AGCTGCGGAT
TTAGGTAAAG ATAGAATTCG AATTAATACC TTGACCCCAG GTTGGGTGAT GACGAAGCGT
CAATTAACGC ACTGGGTTGA TAAGGATACG GCAAAACATA TTGAAGATAA TCAATGTATT
AAAGAATATG TGATGCCTGA AGATATTGCC GCTATGGCGT TATTTTTGGC GGCCGATGAT
AGCAAACTCT GCACTGCACA AAATTTTATT GTAGATGGTG GTTGGATTTA A
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| Protein sequence | MKLSNQYPSL KGKTIFISGG GTGIGACLVR SFLEQGAKVA FADILITESN QLVSTLLASM
PDAIVKFYPC DLVDIAALKN VVTQIEQEIG TIAVLINNAA CDERHSIDEV TPEYWDHCLN
TNLRHYFFAV QAVRPQMQRL GGGSVINLGS MSWHNRQPGM AGYTASKAGA MGLTRGLAAD
LGKDRIRINT LTPGWVMTKR QLTHWVDKDT AKHIEDNQCI KEYVMPEDIA AMALFLAADD
SKLCTAQNFI VDGGWI
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