Gene Nwi_2755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2755 
Symbol 
ID3675094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2995670 
End bp2996458 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID637714322 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_319360 
Protein GI75676939 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.137616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.463862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGT TGAAAGGCAA GACCGCGGTC GTGACCGGAT CAACCAGCGG CATAGGCCTG 
GCCTATGCCC GCGCCTTCGC CGGCGCCGGC GCCAATGTCG TGATCAACGG GCTTGGCGCC
GAGGCTGACA TCGAGAAGGC GCGCTCCGGC CTCGAGGCGG AGTTCGAGGT CAAGGCGGTC
TACTCGCCTG CCGACATGAC GAAGCCCGCC GAGATCGCCG GCATGATCGA ACTGGGCGAA
ACAACCTTCG GCTCGGTCGA TATTCTCGTC AACAATGCCG GCATCCAGTT CGTCTCGCCG
GTCGAGTCGT TCCCTGTCGA GAAGTGGGAC GCGATCATCG CCATCAATCT TTCATCGGCT
TTTCATGCCA TCCGCGCCGC AGTGCCCGGC ATGAAGAAGC GCGGCTGGGG CCGCATCATC
ACTACCGCCT CGGCGCATTC GACGGTGGCA TCGCCCTTCA AGTCGGCCTA TGTGGCCGCC
AAGCACGGCA TAGCCGGCCT CACCAAGGCG GTGGCGCTCG AGCTTGCGCC GCACAGGATC
ACCTGCAATT GCATCAGTCC GGGCTATGTC TGGACCTCGC TGGTGGAAAA GCAGATTCCC
GACACCATGA AGTCGCGCGG CATGACCAGG GAGCAGGTCG TCAACGATGT GCTGCTCGCC
GCGCAACCGA CCAAGCAGTT CGTCACCGTG GAGCAGGTCG CGGCGCTGGC GCTCTATCTC
TGCAGCGACG ATGCCGCCCA GATCACCGGA AGCAACCTGT CGATCGATGG CGGCTGGACG
GCGGCGTAA
 
Protein sequence
MTKLKGKTAV VTGSTSGIGL AYARAFAGAG ANVVINGLGA EADIEKARSG LEAEFEVKAV 
YSPADMTKPA EIAGMIELGE TTFGSVDILV NNAGIQFVSP VESFPVEKWD AIIAINLSSA
FHAIRAAVPG MKKRGWGRII TTASAHSTVA SPFKSAYVAA KHGIAGLTKA VALELAPHRI
TCNCISPGYV WTSLVEKQIP DTMKSRGMTR EQVVNDVLLA AQPTKQFVTV EQVAALALYL
CSDDAAQITG SNLSIDGGWT AA