More than 300 homologs were found in PanDaTox collection
for query gene Rleg_0546 on replicon NC_012850
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012850  Rleg_0546  short-chain dehydrogenase/reductase SDR  100 
 
 
257 aa  527  1e-149  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0503  short-chain dehydrogenase/reductase SDR  90.55 
 
 
253 aa  439  9.999999999999999e-123  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0438  short-chain dehydrogenase/reductase SDR  59.06 
 
 
256 aa  299  3e-80  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.285603 
 
 
-
 
NC_008254  Meso_3587  short-chain dehydrogenase/reductase SDR  55.69 
 
 
255 aa  289  3e-77  Chelativorans sp. BNC1  Bacteria  normal  0.435673  n/a   
 
 
-
 
NC_009049  Rsph17029_0037  short-chain dehydrogenase/reductase SDR  50.58 
 
 
260 aa  235  4e-61  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1369  Short-chain dehydrogenase/reductase SDR  50.58 
 
 
260 aa  234  9e-61  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3834  short-chain dehydrogenase/reductase SDR  45.31 
 
 
256 aa  233  3e-60  Jannaschia sp. CCS1  Bacteria  normal  0.140905  normal 
 
 
-
 
NC_008390  Bamb_0525  short-chain dehydrogenase/reductase SDR  49.4 
 
 
271 aa  232  6e-60  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C1363  D-xylose dehydrogenase  47.22 
 
 
268 aa  229  5e-59  Burkholderia xenovorans LB400  Bacteria  normal  0.879722  normal  0.999685 
 
 
-
 
NC_007908  Rfer_0433  short-chain dehydrogenase/reductase SDR  47.04 
 
 
254 aa  227  1e-58  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2483  short chain dehydrogenase/reductase family oxidoreductase  48.59 
 
 
268 aa  226  2e-58  Burkholderia mallei ATCC 23344  Bacteria  normal  0.709099  n/a   
 
 
-
 
NC_009076  BURPS1106A_3483  NAD dependent epimerase/dehydratase family protein  48.59 
 
 
271 aa  226  2e-58  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3480  short chain dehydrogenase/reductase family oxidoreductase  48.59 
 
 
268 aa  226  2e-58  Burkholderia pseudomallei 1710b  Bacteria  normal  0.538943  n/a   
 
 
-
 
NC_007510  Bcep18194_A3706  Short-chain dehydrogenase/reductase SDR  49 
 
 
268 aa  226  2e-58  Burkholderia sp. 383  Bacteria  normal  0.283086  normal  0.654023 
 
 
-
 
NC_007912  Sde_0771  GntR family transcriptional regulator  46.18 
 
 
256 aa  226  2e-58  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00515913  normal  0.0552536 
 
 
-
 
NC_009074  BURPS668_3445  NAD dependent epimerase/dehydratase family protein  48.59 
 
 
268 aa  226  2e-58  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3302  short chain dehydrogenase/reductase family oxidoreductase  48.59 
 
 
268 aa  226  2e-58  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2761  short-chain dehydrogenase/reductase SDR  49.4 
 
 
264 aa  226  2e-58  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.386853 
 
 
-
 
NC_008785  BMASAVP1_A0403  short chain dehydrogenase/reductase family oxidoreductase  48.59 
 
 
268 aa  226  2e-58  Burkholderia mallei SAVP1  Bacteria  normal  0.253369  n/a   
 
 
-
 
NC_008836  BMA10229_A1263  short chain dehydrogenase/reductase family oxidoreductase  48.59 
 
 
268 aa  226  2e-58  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0761  putative oxidoreductase  43.14 
 
 
255 aa  224  1e-57  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.429001 
 
 
-
 
NC_010551  BamMC406_0549  short-chain dehydrogenase/reductase SDR  48.61 
 
 
270 aa  224  1e-57  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.00753595  normal  0.67708 
 
 
-
 
NC_007802  Jann_2374  short-chain dehydrogenase/reductase SDR  45.91 
 
 
251 aa  223  2e-57  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2071  short-chain dehydrogenase/reductase SDR  42.19 
 
 
256 aa  223  3e-57  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00640028  hitchhiker  0.00000248708 
 
 
-
 
NC_007951  Bxe_A0549  putative short-chain dehydrogenase/reductase, FabG-like  47.39 
 
 
266 aa  221  6e-57  Burkholderia xenovorans LB400  Bacteria  normal  0.204322  normal  0.437639 
 
 
-
 
NC_008043  TM1040_3488  short-chain dehydrogenase/reductase SDR  44.26 
 
 
256 aa  222  6e-57  Ruegeria sp. TM1040  Bacteria  normal  normal  0.742718 
 
 
-
 
NC_009654  Mmwyl1_4106  short-chain dehydrogenase/reductase SDR  43.53 
 
 
256 aa  221  7e-57  Marinomonas sp. MWYL1  Bacteria  normal  decreased coverage  0.00000000241543 
 
 
-
 
NC_012857  Rpic12D_4189  short-chain dehydrogenase/reductase SDR  50.4 
 
 
255 aa  221  7e-57  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4077  short-chain dehydrogenase/reductase SDR  50.4 
 
 
255 aa  221  7e-57  Ralstonia pickettii 12J  Bacteria  normal  0.13973  normal 
 
 
-
 
NC_010681  Bphyt_3408  short-chain dehydrogenase/reductase SDR  46.18 
 
 
266 aa  220  1.9999999999999999e-56  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0359384  normal  0.0764099 
 
 
-
 
NC_008321  Shewmr4_1984  short-chain dehydrogenase/reductase SDR  41.8 
 
 
256 aa  219  3.9999999999999997e-56  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00682949  normal  0.0302653 
 
 
-
 
NC_009484  Acry_2599  short-chain dehydrogenase/reductase SDR  44.71 
 
 
257 aa  218  5e-56  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1990  short-chain dehydrogenase/reductase SDR  41.8 
 
 
256 aa  219  5e-56  Shewanella sp. MR-7  Bacteria  normal  0.0224708  unclonable  0.0000202886 
 
 
-
 
NC_009428  Rsph17025_0027  short-chain dehydrogenase/reductase SDR  49.4 
 
 
288 aa  218  8.999999999999998e-56  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2612  short-chain dehydrogenase/reductase SDR  45.38 
 
 
266 aa  215  7e-55  Burkholderia phymatum STM815  Bacteria  normal  normal  0.227086 
 
 
-
 
NC_009438  Sputcn32_2061  short-chain dehydrogenase/reductase SDR  42.35 
 
 
256 aa  213  2.9999999999999995e-54  Shewanella putrefaciens CN-32  Bacteria  normal  0.138185  n/a   
 
 
-
 
NC_011663  Sbal223_2145  short-chain dehydrogenase/reductase SDR  41.57 
 
 
256 aa  212  4.9999999999999996e-54  Shewanella baltica OS223  Bacteria  normal  0.0597739  normal  0.690345 
 
 
-
 
NC_009952  Dshi_1243  short-chain dehydrogenase/reductase SDR  46 
 
 
258 aa  212  5.999999999999999e-54  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.455666  normal  0.236793 
 
 
-
 
NC_008060  Bcen_0141  short-chain dehydrogenase/reductase SDR  47.39 
 
 
271 aa  211  9e-54  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0592  short-chain dehydrogenase/reductase SDR  47.39 
 
 
271 aa  211  9e-54  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0410788 
 
 
-
 
NC_008542  Bcen2424_0624  short-chain dehydrogenase/reductase SDR  47.39 
 
 
271 aa  211  9e-54  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0853252  n/a   
 
 
-
 
NC_007651  BTH_I1182  short chain dehydrogenase/reductase family oxidoreductase  48.19 
 
 
271 aa  211  1e-53  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0941  short-chain dehydrogenase/reductase SDR  47.62 
 
 
251 aa  209  3e-53  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.995863 
 
 
-
 
NC_012791  Vapar_1041  short-chain dehydrogenase/reductase SDR  46.34 
 
 
258 aa  207  1e-52  Variovorax paradoxus S110  Bacteria  normal  0.208357  n/a   
 
 
-
 
NC_012560  Avin_51440  Short-chain dehydrogenase/reductase (SDR) family protein  47.27 
 
 
260 aa  207  1e-52  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0516  short-chain dehydrogenase/reductase SDR  42.8 
 
 
254 aa  206  2e-52  Marinomonas sp. MWYL1  Bacteria  normal  0.098133  normal 
 
 
-
 
NC_012791  Vapar_5073  short-chain dehydrogenase/reductase SDR  48.19 
 
 
261 aa  203  2e-51  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5401  short-chain dehydrogenase/reductase SDR  45.38 
 
 
258 aa  201  8e-51  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0735  short-chain dehydrogenase/reductase SDR  48 
 
 
270 aa  199  3e-50  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.304096  normal 
 
 
-
 
NC_010338  Caul_4001  short-chain dehydrogenase/reductase SDR  46.4 
 
 
259 aa  198  6e-50  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1729  D-xylose dehydrogenase  45.67 
 
 
245 aa  196  3e-49  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.380531  n/a   
 
 
-
 
BN001304  ANIA_07128  conserved hypothetical protein  37.04 
 
 
275 aa  192  3e-48  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00131023  normal  0.0770254 
 
 
-
 
NC_011365  Gdia_0389  short-chain dehydrogenase/reductase SDR  43.37 
 
 
261 aa  191  9e-48  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.132836  normal  0.554145 
 
 
-
 
NC_008752  Aave_2258  short-chain dehydrogenase/reductase SDR  45.34 
 
 
271 aa  184  2.0000000000000003e-45  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0225727  hitchhiker  0.000000282328 
 
 
-
 
NC_008228  Patl_3529  short-chain dehydrogenase/reductase SDR  38.43 
 
 
270 aa  178  9e-44  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3666  short-chain dehydrogenase/reductase SDR  36.51 
 
 
255 aa  171  1e-41  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00136979  normal 
 
 
-
 
NC_009767  Rcas_0104  short-chain dehydrogenase/reductase SDR  36.99 
 
 
246 aa  146  3e-34  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.650868  normal 
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  34.82 
 
 
254 aa  145  6e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_009523  RoseRS_4552  short-chain dehydrogenase/reductase SDR  37.4 
 
 
246 aa  144  1e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_1429  short-chain dehydrogenase/reductase SDR  36.76 
 
 
256 aa  143  3e-33  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1373  3-oxoacyl-(acyl-carrier-protein) reductase  36.84 
 
 
248 aa  140  1.9999999999999998e-32  Spirosoma linguale DSM 74  Bacteria  normal  0.124306  normal 
 
 
-
 
NC_011370  Rleg2_6271  short-chain dehydrogenase/reductase SDR  38.52 
 
 
256 aa  139  3.9999999999999997e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.28835 
 
 
-
 
NC_010725  Mpop_0259  short-chain dehydrogenase/reductase SDR  38.04 
 
 
249 aa  139  4.999999999999999e-32  Methylobacterium populi BJ001  Bacteria  normal  normal  0.519285 
 
 
-
 
NC_009654  Mmwyl1_4168  short-chain dehydrogenase/reductase SDR  36.84 
 
 
252 aa  138  7.999999999999999e-32  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009955  Dshi_3712  short-chain dehydrogenase/reductase SDR  33.86 
 
 
252 aa  135  6.0000000000000005e-31  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3704  short-chain dehydrogenase/reductase SDR  32.93 
 
 
257 aa  135  9e-31  Chelativorans sp. BNC1  Bacteria  normal  0.416119  n/a   
 
 
-
 
NC_013162  Coch_1503  3-oxoacyl-(acyl-carrier-protein) reductase  36.25 
 
 
248 aa  134  9.999999999999999e-31  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1783  3-ketoacyl-(acyl-carrier-protein) reductase  34.77 
 
 
255 aa  134  1.9999999999999998e-30  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000332127  n/a   
 
 
-
 
NC_008781  Pnap_1241  short-chain dehydrogenase/reductase SDR  38.02 
 
 
260 aa  133  1.9999999999999998e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0407787  normal  0.415093 
 
 
-
 
NC_011898  Ccel_1173  short-chain dehydrogenase/reductase SDR  35.74 
 
 
256 aa  133  3e-30  Clostridium cellulolyticum H10  Bacteria  normal  0.0283651  n/a   
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  35.06 
 
 
258 aa  133  3e-30  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_013037  Dfer_2588  3-oxoacyl-(acyl-carrier-protein) reductase  35.06 
 
 
248 aa  133  3.9999999999999996e-30  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_002620  TC0508  3-ketoacyl-(acyl-carrier-protein) reductase  36.21 
 
 
248 aa  132  5e-30  Chlamydia muridarum Nigg  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2801  3-oxoacyl-(acyl-carrier-protein) reductase  38.8 
 
 
249 aa  132  5e-30  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3001  short-chain dehydrogenase/reductase SDR  37.21 
 
 
249 aa  132  6e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0426  Short-chain dehydrogenase/reductase SDR  36.14 
 
 
253 aa  132  6e-30  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.0324644 
 
 
-
 
NC_008255  CHU_1085  3-oxoacyl-[acyl-carrier-protein] reductase  35.39 
 
 
248 aa  132  6e-30  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.021981  normal  0.0468047 
 
 
-
 
NC_008825  Mpe_A2921  dehydrogenase  36.44 
 
 
261 aa  132  7.999999999999999e-30  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.932836 
 
 
-
 
NC_009901  Spea_2148  short-chain dehydrogenase/reductase SDR  35.77 
 
 
247 aa  131  9e-30  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2089  short-chain dehydrogenase/reductase SDR  35.25 
 
 
246 aa  131  9e-30  Clostridium cellulolyticum H10  Bacteria  normal  0.0163129  n/a   
 
 
-
 
NC_013061  Phep_0695  3-oxoacyl-(acyl-carrier-protein) reductase  34.78 
 
 
247 aa  131  9e-30  Pedobacter heparinus DSM 2366  Bacteria  normal  0.825403  normal 
 
 
-
 
NC_010003  Pmob_0729  short-chain dehydrogenase/reductase SDR  33.61 
 
 
251 aa  130  1.0000000000000001e-29  Petrotoga mobilis SJ95  Bacteria  normal  0.0262547  n/a   
 
 
-
 
NC_007511  Bcep18194_B1106  short chain dehydrogenase  36.72 
 
 
256 aa  131  1.0000000000000001e-29  Burkholderia sp. 383  Bacteria  normal  0.179926  normal  0.355646 
 
 
-
 
NC_010172  Mext_2090  short-chain dehydrogenase/reductase SDR  38.43 
 
 
249 aa  131  1.0000000000000001e-29  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.120513 
 
 
-
 
NC_007650  BTH_II1500  short chain dehydrogenase  36.59 
 
 
256 aa  130  1.0000000000000001e-29  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2365  short-chain dehydrogenase/reductase SDR  38.04 
 
 
249 aa  131  1.0000000000000001e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0450975 
 
 
-
 
NC_010676  Bphyt_7060  short chain dehydrogenase  35.37 
 
 
255 aa  131  1.0000000000000001e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.556367 
 
 
-
 
NC_010524  Lcho_0404  short-chain dehydrogenase/reductase SDR  35.6 
 
 
249 aa  130  3e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0751362 
 
 
-
 
NC_013411  GYMC61_2515  short-chain dehydrogenase/reductase SDR  37.4 
 
 
250 aa  130  3e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012856  Rpic12D_2162  3-ketoacyl-(acyl-carrier-protein) reductase  35.54 
 
 
252 aa  129  3e-29  Ralstonia pickettii 12D  Bacteria  normal  0.0100529  normal  0.780963 
 
 
-
 
NC_011004  Rpal_5138  short-chain dehydrogenase/reductase SDR  35.37 
 
 
248 aa  129  3e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1080  short chain dehydrogenase/reductase family oxidoreductase  34.25 
 
 
246 aa  129  4.0000000000000003e-29  Brucella ovis ATCC 25840  Bacteria  normal  0.38691  n/a   
 
 
-
 
NC_003295  RSc2351  3-ketoacyl-(acyl-carrier-protein) reductase  36.36 
 
 
252 aa  129  5.0000000000000004e-29  Ralstonia solanacearum GMI1000  Bacteria  normal  0.647461  normal 
 
 
-
 
NC_011831  Cagg_0178  short-chain dehydrogenase/reductase SDR  36.29 
 
 
247 aa  129  5.0000000000000004e-29  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000108862  hitchhiker  0.000102827 
 
 
-
 
NC_008786  Veis_3594  short-chain dehydrogenase/reductase SDR  34.75 
 
 
261 aa  129  7.000000000000001e-29  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.806821  normal  0.214566 
 
 
-
 
NC_013743  Htur_2798  short-chain dehydrogenase/reductase SDR  34.9 
 
 
256 aa  129  7.000000000000001e-29  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008391  Bamb_4102  short chain dehydrogenase  36 
 
 
256 aa  129  7.000000000000001e-29  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.188504 
 
 
-
 
NC_009511  Swit_3073  3-ketoacyl-(acyl-carrier-protein) reductase  38.52 
 
 
250 aa  128  7.000000000000001e-29  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1834  short-chain dehydrogenase/reductase SDR  34.8 
 
 
252 aa  128  8.000000000000001e-29  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6140  short-chain dehydrogenase/reductase SDR  34.4 
 
 
254 aa  128  1.0000000000000001e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  0.601598  normal 
 
 
-
 
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