| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4552 |
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| Symbol | |
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| ID | 5211537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5709519 |
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| End bp | 5710259 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640598130 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001278833 |
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| Protein GI | 148658628 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGA AGGGTAAGGT TGCAATTGTG ACCGGCGCAG GTCACGGCAT TGGTAAAGCG
ACCGCGATTG CCTTCGCTCG CGAAGGGGCG CACGTCGCCG TTGTTGACAT CAATATGGCC
GGCGCTGAAG CGACGGTGGC AGAGATTACC AGGCTGGACG GTCGAGCGCT TGCTGTCCAG
GCTGATGTCT CTCAGGCAGC GTCGGTGGAG TCGATGGTCG AAACGGTGCT GGCGTGGGGT
GGTCGGATCG ATGTGCTGCT CAACAATGCC GGTATTACGC GCGACGCTCG CCTGGTCAAA
ATGACCGAGC AGCAATGGGA CGCGGTGATC AATGTCAATC TCAAGGGCGT CTGGTTGTGC
GCGCGCGCCG TTGCGCCGCA CATGAGCGCT CAGGGGAGCG GCTCGATCAT TAACGTCAGT
TCTATCGTCG GGCTGTACGG CAACTTCGGT CAGTCGAACT ATGCCGCAAC CAAAGGCGGC
GTCATTGCAA TGACCAAGAC CTGGGCGCGG GAACTCGGTC CGTCGGGTGT GCGGGTCAAT
GCGGTCACGC CGGGATTCAT CGCTACTGAG ATGATTACGA CCATCCCGGA GAAGGTGATC
CAGACGGTCT GCGAACGCAC GCCGCTACGC CGACTCGGTA AGCCGGAAGA GGTCGCTGCA
GTGTATGTCT TCCTCGCGTC GGATGAATCG AGTTTTATGA CCGGTTCGGT CATTCAGGTG
GACGGCGGCT TGCTCTGGTA G
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| Protein sequence | MRLKGKVAIV TGAGHGIGKA TAIAFAREGA HVAVVDINMA GAEATVAEIT RLDGRALAVQ
ADVSQAASVE SMVETVLAWG GRIDVLLNNA GITRDARLVK MTEQQWDAVI NVNLKGVWLC
ARAVAPHMSA QGSGSIINVS SIVGLYGNFG QSNYAATKGG VIAMTKTWAR ELGPSGVRVN
AVTPGFIATE MITTIPEKVI QTVCERTPLR RLGKPEEVAA VYVFLASDES SFMTGSVIQV
DGGLLW
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