Gene CHU_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1085 
SymbolfabG 
ID4184362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1262797 
End bp1263543 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content42% 
IMG OID638071084 
Product3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_677702 
Protein GI110637495 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.021981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0468047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTAC TTAGTGGAAA AACTGCTCTG GTAACAGGAG CATCAAAAGG CATAGGAAAA 
TCGATCGCGA TGCGTTACGC ACAGGAAGGT GCTAATGTGG CGTTCACCTA TCTTTCAAGC
GTTGAAAAAG GTCAGGCATT AGAAAAAGAA TTACAGGCAT TGGGTATCAA AGCAAAAGGA
TACCGCTCAG ATGCATCTAA ATATACAGAA GCAGAAGAAT TAGTAACTTC CGTATTAGCA
GACTTTGGAC AGCTTGATAT TGTTGTAAAC AATGCAGGTA TTACAAAAGA TGGCTTATTA
ATGCGTATGA CAGAAGAACA ATGGGATTCT GTTATGGAAG TAAATTTAAA ATCGGTATTT
AACCTGACAA AAGCGGCATT AAAACCAATG ATGAAAGCGA AAGCAGGTTC TATTATAAAT
ATGACTTCTG TTGTGGGCAT CAGCGGTAAC GCCGGCCAGA CAAACTACGC TGCCTCTAAA
GCAGGTATCA TTGGTTTCAC AAAATCAGTA GCGCAGGAAT TGGGTTCACG CAACATCCGC
TCAAACGCAA TTGCCCCGGG TTTTATTGAA ACAGAAATGA CGGAAGTACT GGACCCGAAA
GTGAAAGCTG AATGGGAAAA CGGAATTCCG TTGAAACGTG CCGGAAAAAG TGAAGATGTA
GCGAATGCCT GTGTATTCCT TGCATCAGAT CTTTCAACAT ACATTACCGG ACAGGTATTA
CAGGTTGATG GCGGAATGCT GACCTAG
 
Protein sequence
MGLLSGKTAL VTGASKGIGK SIAMRYAQEG ANVAFTYLSS VEKGQALEKE LQALGIKAKG 
YRSDASKYTE AEELVTSVLA DFGQLDIVVN NAGITKDGLL MRMTEEQWDS VMEVNLKSVF
NLTKAALKPM MKAKAGSIIN MTSVVGISGN AGQTNYAASK AGIIGFTKSV AQELGSRNIR
SNAIAPGFIE TEMTEVLDPK VKAEWENGIP LKRAGKSEDV ANACVFLASD LSTYITGQVL
QVDGGMLT