| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4841 |
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| Symbol | |
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| ID | 4595448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | + |
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| Start bp | 171403 |
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| End bp | 172179 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639772628 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_919288 |
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| Protein GI | 119714146 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.166683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCA CGAGGTTCGA CAACAAGGTG GCCGTCATCA CCGGCGCCGG ATCCGGGATC
GGCCGCGCCG CGGCCGAGCT CCTCGCCTCC GAGGGTGCCG CCGTCGGCGT ACTCGACCTG
CGCGCAGAAT CCGCAGAGGA GACCGTCGCG GCGATCGTCG ACTCAGGAGG ACGCGCCATC
GCCCTGGCCG CGAACGTCGC GGATTCCGCC GAGGTCGAGG CAGCCATTGC CAAGGTCGTC
GCCGAGTACG GCGGCCTGAA CGTGCTCTAC AACAACGCTG GCTGCGACTC TCGCGGGTCG
GTCGCCGACG CCACCGATGA GGACTGGGAA CGGGCCTTCT CGGTCAACGC CAAGGGCACT
TTTGTCTGCT CCCGTGCGGC CGTCCCCCAT CTGACCGCAT CCGGCGGAGG AGCCATCGTC
AACCAAGGAT CGGTTGCTGC GCTTGTCGGA GTGCCCAACT TCGCCGCCTA CTGCGCCGCG
AAGGGTGCCG TGGTCGCGCT GACCAGGTCA ATGGCGATCG ACCTAGCGCC GCGCAAGATC
CGGGTGAACG TGATCTGCCC CGGCACCGTG TTCACCCCCT TGATGGAGCC GATGCTGCGA
GCCCGCGGCG ACGGAGACCT TGAGGCCGGT CTGGCCAAGA CCCTGGTGAA GTACCCCATC
GGACGGCTCG GCACCCCCGA GGAGATCGCC CGCGTGGCCG CCTTCCTAGC CTCGGACGAC
TCCTCGTTCC TCACCGGCTC GGTGATCGCC GCCGACGGCG GCATGACGGC TCAGTGA
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| Protein sequence | MKSTRFDNKV AVITGAGSGI GRAAAELLAS EGAAVGVLDL RAESAEETVA AIVDSGGRAI
ALAANVADSA EVEAAIAKVV AEYGGLNVLY NNAGCDSRGS VADATDEDWE RAFSVNAKGT
FVCSRAAVPH LTASGGGAIV NQGSVAALVG VPNFAAYCAA KGAVVALTRS MAIDLAPRKI
RVNVICPGTV FTPLMEPMLR ARGDGDLEAG LAKTLVKYPI GRLGTPEEIA RVAAFLASDD
SSFLTGSVIA ADGGMTAQ
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