Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2921 |
Symbol | |
ID | 4784551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 3105818 |
End bp | 3106603 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640091492 |
Product | dehydrogenase |
Protein accession | YP_001022109 |
Protein GI | 124268105 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.932836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCG TGAACTTCGC GCTTTCGGGC CGTGTGACCG TGGTCACCGG CGCCGCTCAA GGCATCGGCG CGGCCTGTGC GGAGCGCTTC GCGCGCGAGG GCGCACCGGT CGCGCTATGG GACGTGGACG ACGAGCGCGG CCAGACGATG GCCGCGCGCC TGGCCGCCGC CGGCGTGCAG GCGATCTACC GGCACTGCGA CGTGTCGCGC GCCGATCAGG TACAGGCCGC GCACGCCGCC ACGCTGGCGG CCTTCGGCCG GATCGACGTG CTGGTCAACA ACGCCGGCAT CTTCAGGGCG GCCGACTTCC TCGACGTCAC CGAGGCCGAC TGGGACGCGG TGATCGGCGT CAACCTCAAG GGCGCGTTCC TCGTCGGCCA GGCCTGCGCC CGCACGATGG CGTCCCAGGG TCGCGGCGTC ATCGTCAACA TGAGCTCGGT CAACGGCCTG ATGGCCATCC CCACGATCGC CAGCTACAAC GCCAGCAAGG GCGGCATCAA CCAGCTCACC CGCGCGATGG CCCTGGCGCT GGCCGACCAC GGCGTGCGCG TGAATGCGGT GGCACCCGGC ACGATCGCCA CCGAGCTGGC CACGCAGGCC GTGCTGACCA GCGACGAGGC CCGCCAGCGC ATCCTCGGTC GCACGCCCTT GAAGCGGCTG GGCGAGCCGG CCGAGATCGC CGACGTGGTG GCCTTCCTGG CCAGCGACGC GGCCAGCTAC CTGACCGGCC AGATCGTCTA CGCCGATGGC GGCCGGCTTG CGCTGAACTA CACGGTTCAG GCCTGA
|
Protein sequence | MNTVNFALSG RVTVVTGAAQ GIGAACAERF AREGAPVALW DVDDERGQTM AARLAAAGVQ AIYRHCDVSR ADQVQAAHAA TLAAFGRIDV LVNNAGIFRA ADFLDVTEAD WDAVIGVNLK GAFLVGQACA RTMASQGRGV IVNMSSVNGL MAIPTIASYN ASKGGINQLT RAMALALADH GVRVNAVAPG TIATELATQA VLTSDEARQR ILGRTPLKRL GEPAEIADVV AFLASDAASY LTGQIVYADG GRLALNYTVQ A
|
| |