| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0525 |
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| Symbol | |
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| ID | 4309189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 590533 |
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| End bp | 591348 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638148319 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_772418 |
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| Protein GI | 115350579 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCG AAACTTCCGC GCAGGATCCG CGCGCCGCGA GCGACGCGCG CTATGCGCGC
TACCCGAGCC TCGCGGATCG CGCGGTGCTG ATCACGGGCG GTGCGACCGG GATCGGCGCG
GCGTTCGTCG AGCACTTCGC GCGGCAGGGC GCGCGCGTCG CGTTCGTCGA TCTCGACGCG
CAGGCGGGCC AGGCGCTCGC GGAGAGCCTC GCGCAGATGC CGGAGGTACG CCACGCGCCG
CTGTTCCTGC CGTGCGACCT GACCGACATC GACGCGCTGC GCCATGCGAT CGACGCGATC
CGCGCGCGGA TCGGCGCGAT CGCGGTGCTC GTGAACAACG CGGCGAACGA CACGCGCCAC
GCGATCGCCG ACGTGACACC CGCGTCGTTC GACGCGGGCA TCGCGGTGAA CCTGCGCCAC
CAGTTCTTCG CCGCGCAGGC GGTGATCGAC GACATGAAGC AGCGCGGCGG CGGCGCGATC
ATCAATCTCG GCTCGATCAG CTGGATGCTG AAGAACGGCG GCTATCCCGT CTACGTGATG
GCGAAGGCGG CCGTGCAGGG GCTCACGCGC GGGCTCGCGC GCGATCTCGG CCCGTTCGGG
ATCCGCGTGA ATTCGCTGGT GCCCGGCTGG GTGATGACCG ACAAGCAGCG CAAGCTCTGG
CTCGACGACG CGGGCCGCGC GGCGATCAAG GCGGGCCAGT GCATCGACGC CGAGCTGCTG
CCTGATGATC TCGCGCGCAT GGCGCTGTTT CTCGCGGCCG ACGACAGCCG GATGATCACC
GCGCAGGACG TGGTGGTCGA CGGCGGCTGG GCCTGA
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| Protein sequence | MTIETSAQDP RAASDARYAR YPSLADRAVL ITGGATGIGA AFVEHFARQG ARVAFVDLDA
QAGQALAESL AQMPEVRHAP LFLPCDLTDI DALRHAIDAI RARIGAIAVL VNNAANDTRH
AIADVTPASF DAGIAVNLRH QFFAAQAVID DMKQRGGGAI INLGSISWML KNGGYPVYVM
AKAAVQGLTR GLARDLGPFG IRVNSLVPGW VMTDKQRKLW LDDAGRAAIK AGQCIDAELL
PDDLARMALF LAADDSRMIT AQDVVVDGGW A
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