| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3408 |
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| Symbol | |
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| ID | 6282563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3836845 |
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| End bp | 3837645 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622981 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001897022 |
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| Protein GI | 187925380 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0359384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0764099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCTC CGGCCAATGC AAACGTCCGT CTCGCGGACA GCGCTTTCGC ACGTTATCCG
AGCCTCGTCG ACCGCACGGT GTTGATCACG GGCGGCGCGA CCGGCATCGG CGCATCGTTC
GTCGAGCATT TCGCGGCGCA AGGCGCGCGC GTCGCGTTCT TCGATATCGA CGCGAGCGCC
GGTGAAGCGC TCGCCGACGA GCTCGGCGAT TCGAAGCACA AGCCGCTGTT CCTGTCGTGC
GATCTGACCG ATATCGACGC GCTGCAAAAA GCGATCGCCG ACGTGAAGGC CGCGCTGGGT
CCGATCCAAG TGCTGGTGAA CAACGCCGCG AACGACAAAC GCCATACGAT CGGCGAAGTC
ACGCGCGAGT CGTTCGACGC GGGCATAGCA GTGAATATCC GTCACCAGTT CTTCGCGGCG
CAAGCGGTGA TGGAGGATAT GAAAGCCGCC AACAGCGGCT CGATCATCAA TCTCGGCTCG
ATCAGCTGGA TGCTGAAGAA CGGCGGTTAT CCGGTCTATG TGATGTCGAA ATCCGCGGTG
CAGGGTTTGA CGCGCGGTCT CGCGCGCGAC CTCGGTCACT TCAATATTCG CGTCAATACG
CTGGTGCCAG GCTGGGTGAT GACCGAGAAG CAGAAGCGGC TGTGGCTCGA CGACGCGGGC
CGTCGTTCGA TCAAGGAAGG GCAGTGCATC GACGCGGAGC TGGAACCGGC CGACCTCGCC
CGCATGGCGC TCTTCCTCGC CGCCGACGAC AGCCGCATGA TCACCGCGCA GGACATCGTC
GTGGACGGAG GCTGGGCGTG A
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| Protein sequence | MSSPANANVR LADSAFARYP SLVDRTVLIT GGATGIGASF VEHFAAQGAR VAFFDIDASA
GEALADELGD SKHKPLFLSC DLTDIDALQK AIADVKAALG PIQVLVNNAA NDKRHTIGEV
TRESFDAGIA VNIRHQFFAA QAVMEDMKAA NSGSIINLGS ISWMLKNGGY PVYVMSKSAV
QGLTRGLARD LGHFNIRVNT LVPGWVMTEK QKRLWLDDAG RRSIKEGQCI DAELEPADLA
RMALFLAADD SRMITAQDIV VDGGWA
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