| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3712 |
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| Symbol | |
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| ID | 5714241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | - |
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| Start bp | 117527 |
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| End bp | 118285 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641276628 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001541924 |
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| Protein GI | 159046252 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGGC TTGACGGAAA AGTTGCGATT ATCACAGGGG CGGCCCAAGG CATCGGTGCC
GTCTATGCTC AGGCGCTTGC GGATGAAGGC GCCAAGGTGA TGATCGCCGA CATTCTCGAC
GGAAACCCCA CCGCATCACG GATCTCGGCC CAGGGCGGCA CCGCGGACTT CATGCAGACC
GATGTCAGCG ACGAAAGCAG CGTTGCGGCG ATGGTCGACG CAACCGTCGC GAAATGGGGC
GGCGTTGATA TTCTGATAAA CAACGCGGCC ATCTGGGCCT CGCTGCGCGC CAAGCCGTTC
GAGGACATCT CGCCCGAGGA ATGGGACAAG CTGATGGCGG TCAACGTCAA GGGCCCGTTC
CTGTGCGCCC GCGCCGTCGT GCCGCATATG CGGGCCGGGA AATACGGACG CATCGTCAAC
ATCGCGTCGG GCACCGCCTA CAAGGGCACA CCGAATTTCC TGCATTACGT CACCTCGAAA
GGCGCCGTGA TCGCCATGAC CCGCGCCCTG GCGCGCGAAG TGGGCGAGGA CGGGATCACC
GTCAACACGC TGGCCCCCGG CCTGGTGCTG TCCGAACAGG TCGTCGCCAG CCCCGAGCTC
TTGGAAAAGC TGAGTGCGCC GGTGATGGCC AGCCGGGCGA TCAAGCGCGA TCAACTGCCC
CAAGACCTCG TCGGCCCGCT GCTGTTCCTG GTCTCGGACG ATGCCGCATT CATGACCGGC
GAAGTCACCG TGATCGACGG CGGCTCTGTC ATGCACTGA
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| Protein sequence | MPRLDGKVAI ITGAAQGIGA VYAQALADEG AKVMIADILD GNPTASRISA QGGTADFMQT
DVSDESSVAA MVDATVAKWG GVDILINNAA IWASLRAKPF EDISPEEWDK LMAVNVKGPF
LCARAVVPHM RAGKYGRIVN IASGTAYKGT PNFLHYVTSK GAVIAMTRAL AREVGEDGIT
VNTLAPGLVL SEQVVASPEL LEKLSAPVMA SRAIKRDQLP QDLVGPLLFL VSDDAAFMTG
EVTVIDGGSV MH
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