Gene Dfer_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2588 
Symbol 
ID8226160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3194560 
End bp3195306 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content54% 
IMG OID644930419 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_003086970 
Protein GI255036349 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAG TAGCAAATAA AGTTGCATTG GTAACAGGGG CTTCGCGGGG TATCGGACGT 
TCGATCGCGC TGCGCCTGGC TCAGGAAGGT GCTGATGTCG CATTTACATA TCTGTCCAGC
GTCGAGAAAG GCGAGGCCCT TGCCCGCGAA CTGGAAGCAT TCGGCGTGAA GGCGAAAGGC
TACCGCTCCG ATGCATCGGA TTTCCAGGCG GCTGACCAGC TCATTACCGA CGTGATCGCC
GATTTCGGGA AACTGGACGT GCTCATCAAC AATGCAGGTG TTACCCGCGA CGGGCTCCTG
ATGCGCATGA GCGAAGAGCA ATGGGACACC GTGATCAACA TCAACCTGAA ATCGGTTTTT
AACCTTACCA AGGCCGCTAC GAAATCTATG ATCCGCGCCA AAAGCGGTTC GATTATCAAT
ATCACATCGG TGGTTGGTAT ACGCGGCAAC GCCGGGCAGT CTAACTACGC TGCTTCCAAG
GCCGGTATCA TCGGCTTCAC CAAGTCGATT GCATTGGAAT TGGGTTCCAG AAATATCCGC
TCGAATGCCG TTGCGCCGGG TTTTATCGAA ACTGAAATGA CCGACGCGGT AGATGCCAAA
GCGGTGGACG ACTGGAAACA ATCTATCCCG ATGAAACGCG GAGGCCAGCC CGAAGAAGTG
GCGGACGCCT GCGTGTTCCT CGCATCGGAT ATGTCGCGCT ATATCACCGG CCAGGTAATC
CAGGTTGACG GTGGTATGTT AACATAG
 
Protein sequence
MKLVANKVAL VTGASRGIGR SIALRLAQEG ADVAFTYLSS VEKGEALARE LEAFGVKAKG 
YRSDASDFQA ADQLITDVIA DFGKLDVLIN NAGVTRDGLL MRMSEEQWDT VININLKSVF
NLTKAATKSM IRAKSGSIIN ITSVVGIRGN AGQSNYAASK AGIIGFTKSI ALELGSRNIR
SNAVAPGFIE TEMTDAVDAK AVDDWKQSIP MKRGGQPEEV ADACVFLASD MSRYITGQVI
QVDGGMLT