More than 300 homologs were found in PanDaTox collection
for query gene Gdia_0389 on replicon NC_011365
Organism: Gluconacetobacter diazotrophicus PAl 5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011365  Gdia_0389  short-chain dehydrogenase/reductase SDR  100 
 
 
261 aa  521  1e-147  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.132836  normal  0.554145 
 
 
-
 
NC_007951  Bxe_A0549  putative short-chain dehydrogenase/reductase, FabG-like  58.57 
 
 
266 aa  302  4.0000000000000003e-81  Burkholderia xenovorans LB400  Bacteria  normal  0.204322  normal  0.437639 
 
 
-
 
NC_010681  Bphyt_3408  short-chain dehydrogenase/reductase SDR  57.37 
 
 
266 aa  300  1e-80  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0359384  normal  0.0764099 
 
 
-
 
NC_010622  Bphy_2612  short-chain dehydrogenase/reductase SDR  55.51 
 
 
266 aa  287  1e-76  Burkholderia phymatum STM815  Bacteria  normal  normal  0.227086 
 
 
-
 
NC_006348  BMA2483  short chain dehydrogenase/reductase family oxidoreductase  58.4 
 
 
268 aa  285  5.999999999999999e-76  Burkholderia mallei ATCC 23344  Bacteria  normal  0.709099  n/a   
 
 
-
 
NC_009076  BURPS1106A_3483  NAD dependent epimerase/dehydratase family protein  58.4 
 
 
271 aa  285  5.999999999999999e-76  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3480  short chain dehydrogenase/reductase family oxidoreductase  58.4 
 
 
268 aa  285  5.999999999999999e-76  Burkholderia pseudomallei 1710b  Bacteria  normal  0.538943  n/a   
 
 
-
 
NC_009080  BMA10247_3302  short chain dehydrogenase/reductase family oxidoreductase  58.4 
 
 
268 aa  285  5.999999999999999e-76  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3445  NAD dependent epimerase/dehydratase family protein  58.4 
 
 
268 aa  285  5.999999999999999e-76  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1263  short chain dehydrogenase/reductase family oxidoreductase  58.4 
 
 
268 aa  285  5.999999999999999e-76  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0403  short chain dehydrogenase/reductase family oxidoreductase  58.4 
 
 
268 aa  285  5.999999999999999e-76  Burkholderia mallei SAVP1  Bacteria  normal  0.253369  n/a   
 
 
-
 
NC_012791  Vapar_5073  short-chain dehydrogenase/reductase SDR  56.54 
 
 
261 aa  279  3e-74  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1182  short chain dehydrogenase/reductase family oxidoreductase  60 
 
 
271 aa  278  7e-74  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3706  Short-chain dehydrogenase/reductase SDR  57.2 
 
 
268 aa  278  8e-74  Burkholderia sp. 383  Bacteria  normal  0.283086  normal  0.654023 
 
 
-
 
NC_010084  Bmul_2761  short-chain dehydrogenase/reductase SDR  57.37 
 
 
264 aa  278  8e-74  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.386853 
 
 
-
 
NC_008390  Bamb_0525  short-chain dehydrogenase/reductase SDR  56.92 
 
 
271 aa  275  8e-73  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0549  short-chain dehydrogenase/reductase SDR  57.31 
 
 
270 aa  273  3e-72  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.00753595  normal  0.67708 
 
 
-
 
NC_009654  Mmwyl1_4106  short-chain dehydrogenase/reductase SDR  53.6 
 
 
256 aa  272  5.000000000000001e-72  Marinomonas sp. MWYL1  Bacteria  normal  decreased coverage  0.00000000241543 
 
 
-
 
NC_007908  Rfer_0433  short-chain dehydrogenase/reductase SDR  53.39 
 
 
254 aa  269  4e-71  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0141  short-chain dehydrogenase/reductase SDR  57.2 
 
 
271 aa  263  2e-69  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0624  short-chain dehydrogenase/reductase SDR  57.2 
 
 
271 aa  263  2e-69  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0853252  n/a   
 
 
-
 
NC_012560  Avin_51440  Short-chain dehydrogenase/reductase (SDR) family protein  54.12 
 
 
260 aa  263  2e-69  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0592  short-chain dehydrogenase/reductase SDR  57.2 
 
 
271 aa  263  2e-69  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0410788 
 
 
-
 
NC_012791  Vapar_1041  short-chain dehydrogenase/reductase SDR  53.52 
 
 
258 aa  256  2e-67  Variovorax paradoxus S110  Bacteria  normal  0.208357  n/a   
 
 
-
 
NC_007802  Jann_2374  short-chain dehydrogenase/reductase SDR  51 
 
 
251 aa  254  1.0000000000000001e-66  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0735  short-chain dehydrogenase/reductase SDR  52.9 
 
 
270 aa  252  5.000000000000001e-66  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.304096  normal 
 
 
-
 
NC_008577  Shewana3_2071  short-chain dehydrogenase/reductase SDR  46.61 
 
 
256 aa  248  8e-65  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00640028  hitchhiker  0.00000248708 
 
 
-
 
NC_008752  Aave_2258  short-chain dehydrogenase/reductase SDR  55.69 
 
 
271 aa  246  3e-64  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0225727  hitchhiker  0.000000282328 
 
 
-
 
NC_007912  Sde_0771  GntR family transcriptional regulator  50.2 
 
 
256 aa  245  4.9999999999999997e-64  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00515913  normal  0.0552536 
 
 
-
 
NC_008321  Shewmr4_1984  short-chain dehydrogenase/reductase SDR  46.22 
 
 
256 aa  244  9e-64  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00682949  normal  0.0302653 
 
 
-
 
NC_008322  Shewmr7_1990  short-chain dehydrogenase/reductase SDR  46.22 
 
 
256 aa  244  9.999999999999999e-64  Shewanella sp. MR-7  Bacteria  normal  0.0224708  unclonable  0.0000202886 
 
 
-
 
NC_009484  Acry_2599  short-chain dehydrogenase/reductase SDR  49 
 
 
257 aa  244  9.999999999999999e-64  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5401  short-chain dehydrogenase/reductase SDR  53.6 
 
 
258 aa  242  5e-63  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2145  short-chain dehydrogenase/reductase SDR  45.42 
 
 
256 aa  241  9e-63  Shewanella baltica OS223  Bacteria  normal  0.0597739  normal  0.690345 
 
 
-
 
NC_007912  Sde_0761  putative oxidoreductase  47.37 
 
 
255 aa  241  1e-62  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.429001 
 
 
-
 
NC_009438  Sputcn32_2061  short-chain dehydrogenase/reductase SDR  45.02 
 
 
256 aa  238  6.999999999999999e-62  Shewanella putrefaciens CN-32  Bacteria  normal  0.138185  n/a   
 
 
-
 
NC_007953  Bxe_C1363  D-xylose dehydrogenase  50.2 
 
 
268 aa  237  2e-61  Burkholderia xenovorans LB400  Bacteria  normal  0.879722  normal  0.999685 
 
 
-
 
NC_008043  TM1040_3488  short-chain dehydrogenase/reductase SDR  49.17 
 
 
256 aa  229  3e-59  Ruegeria sp. TM1040  Bacteria  normal  normal  0.742718 
 
 
-
 
NC_007802  Jann_3834  short-chain dehydrogenase/reductase SDR  46.43 
 
 
256 aa  228  1e-58  Jannaschia sp. CCS1  Bacteria  normal  0.140905  normal 
 
 
-
 
NC_008254  Meso_3587  short-chain dehydrogenase/reductase SDR  48.8 
 
 
255 aa  224  1e-57  Chelativorans sp. BNC1  Bacteria  normal  0.435673  n/a   
 
 
-
 
NC_007493  RSP_1369  Short-chain dehydrogenase/reductase SDR  51.2 
 
 
260 aa  220  9.999999999999999e-57  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0037  short-chain dehydrogenase/reductase SDR  51.6 
 
 
260 aa  220  9.999999999999999e-57  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_0027  short-chain dehydrogenase/reductase SDR  52.73 
 
 
288 aa  220  1.9999999999999999e-56  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1243  short-chain dehydrogenase/reductase SDR  51.03 
 
 
258 aa  219  3.9999999999999997e-56  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.455666  normal  0.236793 
 
 
-
 
NC_010678  Rpic_4077  short-chain dehydrogenase/reductase SDR  47.41 
 
 
255 aa  218  6e-56  Ralstonia pickettii 12J  Bacteria  normal  0.13973  normal 
 
 
-
 
NC_012857  Rpic12D_4189  short-chain dehydrogenase/reductase SDR  47.41 
 
 
255 aa  218  6e-56  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0516  short-chain dehydrogenase/reductase SDR  46 
 
 
254 aa  217  2e-55  Marinomonas sp. MWYL1  Bacteria  normal  0.098133  normal 
 
 
-
 
NC_010506  Swoo_3666  short-chain dehydrogenase/reductase SDR  45.53 
 
 
255 aa  214  1.9999999999999998e-54  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00136979  normal 
 
 
-
 
NC_008228  Patl_3529  short-chain dehydrogenase/reductase SDR  43.25 
 
 
270 aa  211  7.999999999999999e-54  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4001  short-chain dehydrogenase/reductase SDR  46.25 
 
 
259 aa  210  2e-53  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0941  short-chain dehydrogenase/reductase SDR  46.61 
 
 
251 aa  201  9.999999999999999e-51  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.995863 
 
 
-
 
NC_007963  Csal_1729  D-xylose dehydrogenase  45.45 
 
 
245 aa  187  1e-46  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.380531  n/a   
 
 
-
 
NC_009636  Smed_0438  short-chain dehydrogenase/reductase SDR  45.45 
 
 
256 aa  185  8e-46  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.285603 
 
 
-
 
BN001304  ANIA_07128  conserved hypothetical protein  38.72 
 
 
275 aa  184  1.0000000000000001e-45  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00131023  normal  0.0770254 
 
 
-
 
NC_011369  Rleg2_0503  short-chain dehydrogenase/reductase SDR  44.18 
 
 
253 aa  176  3e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0546  short-chain dehydrogenase/reductase SDR  43.37 
 
 
257 aa  175  8e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0716  short-chain dehydrogenase/reductase SDR  41.77 
 
 
249 aa  150  2e-35  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0259  short-chain dehydrogenase/reductase SDR  41.37 
 
 
249 aa  146  4.0000000000000006e-34  Methylobacterium populi BJ001  Bacteria  normal  normal  0.519285 
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  35.57 
 
 
254 aa  146  4.0000000000000006e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_007963  Csal_1022  short chain dehydrogenase  33.86 
 
 
261 aa  144  2e-33  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.917277  n/a   
 
 
-
 
NC_013411  GYMC61_1779  short-chain dehydrogenase/reductase SDR  35.37 
 
 
249 aa  144  2e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010335  Caul_5136  short-chain dehydrogenase/reductase SDR  33.6 
 
 
254 aa  142  7e-33  Caulobacter sp. K31  Bacteria  normal  0.708802  normal 
 
 
-
 
NC_003296  RS05466  dehydrogenase oxidoreductase protein  39.15 
 
 
255 aa  141  9.999999999999999e-33  Ralstonia solanacearum GMI1000  Bacteria  normal  0.968817  normal  0.104137 
 
 
-
 
NC_013526  Tter_1966  short-chain dehydrogenase/reductase SDR  34.8 
 
 
254 aa  140  1.9999999999999998e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0357  putative short-chain dehydrogenase  39.92 
 
 
246 aa  140  1.9999999999999998e-32  Burkholderia xenovorans LB400  Bacteria  normal  0.0963856  hitchhiker  0.00000797271 
 
 
-
 
NC_008391  Bamb_4102  short chain dehydrogenase  36.76 
 
 
256 aa  139  3e-32  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.188504 
 
 
-
 
NC_009901  Spea_2148  short-chain dehydrogenase/reductase SDR  33.88 
 
 
247 aa  139  6e-32  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1173  short-chain dehydrogenase/reductase SDR  32.24 
 
 
256 aa  137  1e-31  Clostridium cellulolyticum H10  Bacteria  normal  0.0283651  n/a   
 
 
-
 
NC_010676  Bphyt_7060  short chain dehydrogenase  34.27 
 
 
255 aa  137  2e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.556367 
 
 
-
 
NC_010086  Bmul_3985  short chain dehydrogenase  36.76 
 
 
256 aa  137  2e-31  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.473882  normal  0.0186737 
 
 
-
 
NC_007794  Saro_0512  short-chain dehydrogenase/reductase SDR  36.55 
 
 
248 aa  137  2e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3281  short-chain dehydrogenase/reductase SDR  35.54 
 
 
248 aa  136  3.0000000000000003e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.846295 
 
 
-
 
NC_007952  Bxe_B0176  short chain dehydrogenase  35.89 
 
 
255 aa  136  3.0000000000000003e-31  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3667  short-chain dehydrogenase/reductase SDR  37.35 
 
 
259 aa  136  4e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1783  3-ketoacyl-(acyl-carrier-protein) reductase  32.51 
 
 
255 aa  136  4e-31  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000332127  n/a   
 
 
-
 
NC_009720  Xaut_1541  short-chain dehydrogenase/reductase SDR  37.35 
 
 
282 aa  136  4e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  0.458273  normal  0.643271 
 
 
-
 
NC_008781  Pnap_1241  short-chain dehydrogenase/reductase SDR  37.7 
 
 
260 aa  136  4e-31  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0407787  normal  0.415093 
 
 
-
 
NC_008726  Mvan_3000  short-chain dehydrogenase/reductase SDR  35.12 
 
 
248 aa  135  5e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.767749  normal  0.280666 
 
 
-
 
NC_010002  Daci_1543  3-hydroxybutyrate dehydrogenase  33.72 
 
 
260 aa  135  6.0000000000000005e-31  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1897  short-chain dehydrogenase/reductase SDR  35.92 
 
 
247 aa  135  6.0000000000000005e-31  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.00100219 
 
 
-
 
NC_007511  Bcep18194_B1106  short chain dehydrogenase  35.89 
 
 
256 aa  135  7.000000000000001e-31  Burkholderia sp. 383  Bacteria  normal  0.179926  normal  0.355646 
 
 
-
 
NC_010552  BamMC406_4567  short chain dehydrogenase  35.97 
 
 
256 aa  135  7.000000000000001e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  0.16205  hitchhiker  0.000267636 
 
 
-
 
NC_008148  Rxyl_0541  short-chain dehydrogenase/reductase SDR  34.4 
 
 
251 aa  135  7.000000000000001e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1500  short chain dehydrogenase  35.89 
 
 
256 aa  135  9e-31  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6140  short-chain dehydrogenase/reductase SDR  37.35 
 
 
254 aa  135  9e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.601598  normal 
 
 
-
 
NC_007348  Reut_B3571  short chain dehydrogenase  36.54 
 
 
256 aa  134  9.999999999999999e-31  Ralstonia eutropha JMP134  Bacteria  normal  0.0445953  n/a   
 
 
-
 
NC_010505  Mrad2831_3001  short-chain dehydrogenase/reductase SDR  38.55 
 
 
249 aa  134  9.999999999999999e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0224  7-alpha-hydroxysteroid dehydrogenase  37.76 
 
 
255 aa  134  9.999999999999999e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.717009 
 
 
-
 
NC_009955  Dshi_3712  short-chain dehydrogenase/reductase SDR  33.85 
 
 
252 aa  134  9.999999999999999e-31  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2271  short-chain dehydrogenase/reductase SDR  36.76 
 
 
257 aa  134  1.9999999999999998e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3319  d-beta-hydroxybutyrate dehydrogenase  32.81 
 
 
256 aa  134  1.9999999999999998e-30  Agrobacterium vitis S4  Bacteria  normal  0.0697406  n/a   
 
 
-
 
NC_013510  Tcur_3357  short-chain dehydrogenase/reductase SDR  35.48 
 
 
253 aa  133  3e-30  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00078495  n/a   
 
 
-
 
NC_012791  Vapar_3308  short-chain dehydrogenase/reductase SDR  39.44 
 
 
249 aa  133  3e-30  Variovorax paradoxus S110  Bacteria  normal  0.616941  n/a   
 
 
-
 
NC_008254  Meso_2966  short-chain dehydrogenase/reductase SDR  35.43 
 
 
260 aa  133  3e-30  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3583  short-chain dehydrogenase/reductase SDR  35.6 
 
 
279 aa  133  3e-30  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_2067  short-chain dehydrogenase/reductase SDR  34.57 
 
 
246 aa  132  3.9999999999999996e-30  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2746  short-chain dehydrogenase/reductase SDR  37.55 
 
 
249 aa  132  3.9999999999999996e-30  Methylobacterium sp. 4-46  Bacteria  normal  0.458004  normal  0.197887 
 
 
-
 
NC_012791  Vapar_2220  3-hydroxybutyrate dehydrogenase  33.33 
 
 
260 aa  132  6e-30  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1834  short-chain dehydrogenase/reductase SDR  32.27 
 
 
252 aa  132  6e-30  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0104  short-chain dehydrogenase/reductase SDR  34.96 
 
 
246 aa  132  6e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.650868  normal 
 
 
-
 
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