| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3667 |
|---|
| Symbol | |
|---|
| ID | 5077815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | + |
|---|
| Start bp | 297019 |
|---|
| End bp | 297798 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640481390 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001166052 |
|---|
| Protein GI | 146275892 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGGC TATCGGGCAA GGTGGCGATC GTCACCGGTG GCGCGCGCGG CATGGGTGCG
GCGACAAGCC GGCTTTTCGT GGCCGAGGGC GCGAAAGTGG CGATTGCCGA CGTTCTGGAC
GAGGCCGGGG AGGCGCTGGC GGCAGAGCTT GGCGATGCGG CGCGCTTCTT CAAGCTTGAC
GTGACCAGCG AGGACAACTG GGCTTCGGTC GTCAGCGAAG TCGAGGCGGC GCTGGGGCCG
GTCGACGTGC TGGTGAACAA CGCCGGCATC CTCATGTTCA AGAGCCTGCT CGAGACGACC
AAGGCGGACT ACGAGAAGGT GCTGGGCGTC AACCTGGTTG GCGAGTTCCT GGGCATCAAG
GCAGTGGCGC CGGGAATGAT CGCGCGCGGC AAGGGTTCGA TCGTCAACAT CTCTTCGGTA
GACGGAATGA AGGGCGCGAA CAGCCTTGTC GCCTACGCCT CGTCCAAGTG GGGCGTGCGC
GGGCTGACCA AGGTCGCTGC AATGGAGCTT GGTCACAAGG GCATCCGCGT CAACTCAGTC
CATCCCGGCG GGGTCGACAC GGTCATGTCC AACCATTCCG GCGCAGCGCG CGAGGACGTG
GACAAGGGCT ATGCCAACGT GCCGCTGCAG CGCATCGGCG GGCCCGAGGA AGTGGCGGCG
GCGAGCCTGT TCCTGGCGAG CGACGACGCA TCCTACCTCC ACGGCGCGGA GATCGTGGTG
GATGGCGGGA TGACCGTCGG CACCTACTAC ATGGGCTTTC CGGGTTCGCC GGGCATGTGA
|
|---|
| Protein sequence | MGRLSGKVAI VTGGARGMGA ATSRLFVAEG AKVAIADVLD EAGEALAAEL GDAARFFKLD
VTSEDNWASV VSEVEAALGP VDVLVNNAGI LMFKSLLETT KADYEKVLGV NLVGEFLGIK
AVAPGMIARG KGSIVNISSV DGMKGANSLV AYASSKWGVR GLTKVAAMEL GHKGIRVNSV
HPGGVDTVMS NHSGAAREDV DKGYANVPLQ RIGGPEEVAA ASLFLASDDA SYLHGAEIVV
DGGMTVGTYY MGFPGSPGM
|
|---|
| |