| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3000 |
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| Symbol | |
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| ID | 4648528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 3168897 |
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| End bp | 3169643 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639806480 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_953811 |
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| Protein GI | 120403982 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.767749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.280666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGCG TGGACGGAAA AGTGGCACTC ATCAGTGGCG GCGCGCAGGG AATGGGCGCC
GCCGATGCCC GGGCGCTGAT CGCCGAAGGC GCCAAGGTCG TCATCGGTGA CATCCTCGAC
GACAAGGGCA AGGCGCTGGC GGACGAGATC AACGCCGAGA CACCCGACTC GATCCGTTAC
GTGCATCTCG ACGTCACCCA GGCCGACCAG TGGGAGGCCG CCGTGGCCAC CGCTGTCGAC
GCGTTCGGCA AGCTCAACGT GCTTGTCAAC AATGCGGGCA CGGTGGCGCT GGGGCAGATC
GGCCAGTTCG ATATGGCCAA GTGGCAGAAG GTCATCGACG TCAACCTCAC CGGCACGTTC
CTCGGAATGC AGGCGTCCGT CGAGGCGATG AAGACCGCGG GCGGCGGGTC GATCATCAAC
ATCTCCTCCA TCGAGGGTCT GCGCGGTGCG GTCATGGTGC ACCCGTACGT GGCGTCCAAG
TGGGCGGTGC GCGGCCTCAC GAAGTCCGCG GCCCTCGAGC TCGGGTCACA CAACATCCGG
GTCAACTCGG TGCACCCCGG CTTCATCCGC ACCCCGATGA CCAAGCACTT CCCGGACAAC
ATGCTGCGCA TCCCGCTGGG CCGCCCGGGT CAGCCCGAAG AGGTCGCCAC CTTCGTGGTG
TTCCTGGCCA GCGACGAGTC GCGGTACGCG ACAGGCGCCG AATTCGTGAT GGACGGCGGC
CTGACCAACG ACGTTCCGCA CAAGTAG
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| Protein sequence | MGRVDGKVAL ISGGAQGMGA ADARALIAEG AKVVIGDILD DKGKALADEI NAETPDSIRY
VHLDVTQADQ WEAAVATAVD AFGKLNVLVN NAGTVALGQI GQFDMAKWQK VIDVNLTGTF
LGMQASVEAM KTAGGGSIIN ISSIEGLRGA VMVHPYVASK WAVRGLTKSA ALELGSHNIR
VNSVHPGFIR TPMTKHFPDN MLRIPLGRPG QPEEVATFVV FLASDESRYA TGAEFVMDGG
LTNDVPHK
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