Gene Bxe_B0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0176 
Symbol 
ID4009335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp3172124 
End bp3172891 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content67% 
IMG OID637952497 
Productshort chain dehydrogenase 
Protein accessionYP_555117 
Protein GI91779909 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGACG ACGCGCCCGC AGCGCTCAAC GGACGTCGCG TCCTCGTGAC GGGCGGCGCG 
CGCGGTCTCG GCGCGGCGTT TGTCCGCTCG CTGGTGCAAG CCGGCGCGCG CGTGGTGTTC
GGCGACGTGC TGCATGAAGA AGGTGAAGCG CTAGCAGCGG CGCTCGCCGA ACCAGGTCAT
GCGGTCACCT ACGTGCCGCT CGATCTCGCC GACCCCGCAA GCATCAGGCA ATTCGCGGAG
CAGGGCGCGG CGCAACTCGG CGGCATCGAT GCACTGATCA ACAACGCGGC CATCACCAAC
TCCGGCGGCA AGTTCGCCGA CGAGCTGTCG GTAGAGACGT GGGACGCCGT GATGAACGTC
AACGTGCGCG GCACCTGGCT GATGAGCACC GCCGCGCTGC CGTATCTGCG CGACTCGGGC
CGCGGCAGCA TCGTCAACAT TGCGTCGGAC ACGGCGATGT GGGGTGCGCC GAAGCTGCTC
GCTTATGTCG CGAGCAAAGG CGCGGTGATT TCGATGACCC GCTCGCTCGC GCGTGAATTC
GGCGCGCACC AGGTGACGGT CAATGCGATC GCGCCGGGAC TGACCGAAGT CGAGGCAACC
GCGTATGTGC CCGCCGAGCG TCATCAGTAT TACCTGCAAG GCCGCGCGCT CACGCGCGCA
CAAGTGCCCG ACGACGTCAC CGGGCCGGTG CTGTTCCTGT TGTCCGATGC CGCTCGCTTC
GTGACCGGCC AACTGCTGCC GGTCAACGGC GGCTTCGTGA TGAATTGA
 
Protein sequence
MHDDAPAALN GRRVLVTGGA RGLGAAFVRS LVQAGARVVF GDVLHEEGEA LAAALAEPGH 
AVTYVPLDLA DPASIRQFAE QGAAQLGGID ALINNAAITN SGGKFADELS VETWDAVMNV
NVRGTWLMST AALPYLRDSG RGSIVNIASD TAMWGAPKLL AYVASKGAVI SMTRSLAREF
GAHQVTVNAI APGLTEVEAT AYVPAERHQY YLQGRALTRA QVPDDVTGPV LFLLSDAARF
VTGQLLPVNG GFVMN