Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0176 |
Symbol | |
ID | 4009335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 3172124 |
End bp | 3172891 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637952497 |
Product | short chain dehydrogenase |
Protein accession | YP_555117 |
Protein GI | 91779909 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGACG ACGCGCCCGC AGCGCTCAAC GGACGTCGCG TCCTCGTGAC GGGCGGCGCG CGCGGTCTCG GCGCGGCGTT TGTCCGCTCG CTGGTGCAAG CCGGCGCGCG CGTGGTGTTC GGCGACGTGC TGCATGAAGA AGGTGAAGCG CTAGCAGCGG CGCTCGCCGA ACCAGGTCAT GCGGTCACCT ACGTGCCGCT CGATCTCGCC GACCCCGCAA GCATCAGGCA ATTCGCGGAG CAGGGCGCGG CGCAACTCGG CGGCATCGAT GCACTGATCA ACAACGCGGC CATCACCAAC TCCGGCGGCA AGTTCGCCGA CGAGCTGTCG GTAGAGACGT GGGACGCCGT GATGAACGTC AACGTGCGCG GCACCTGGCT GATGAGCACC GCCGCGCTGC CGTATCTGCG CGACTCGGGC CGCGGCAGCA TCGTCAACAT TGCGTCGGAC ACGGCGATGT GGGGTGCGCC GAAGCTGCTC GCTTATGTCG CGAGCAAAGG CGCGGTGATT TCGATGACCC GCTCGCTCGC GCGTGAATTC GGCGCGCACC AGGTGACGGT CAATGCGATC GCGCCGGGAC TGACCGAAGT CGAGGCAACC GCGTATGTGC CCGCCGAGCG TCATCAGTAT TACCTGCAAG GCCGCGCGCT CACGCGCGCA CAAGTGCCCG ACGACGTCAC CGGGCCGGTG CTGTTCCTGT TGTCCGATGC CGCTCGCTTC GTGACCGGCC AACTGCTGCC GGTCAACGGC GGCTTCGTGA TGAATTGA
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Protein sequence | MHDDAPAALN GRRVLVTGGA RGLGAAFVRS LVQAGARVVF GDVLHEEGEA LAAALAEPGH AVTYVPLDLA DPASIRQFAE QGAAQLGGID ALINNAAITN SGGKFADELS VETWDAVMNV NVRGTWLMST AALPYLRDSG RGSIVNIASD TAMWGAPKLL AYVASKGAVI SMTRSLAREF GAHQVTVNAI APGLTEVEAT AYVPAERHQY YLQGRALTRA QVPDDVTGPV LFLLSDAARF VTGQLLPVNG GFVMN
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