Gene Mrub_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1897 
Symbol 
ID8880005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1956745 
End bp1957488 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content68% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003507674 
Protein GI291296276 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00100219 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGATTTCC AGGGAAAAGC GGTGATCGTA ACCGGAGGCG CCTCGGGCAT GGGCGAGGCC 
ACGGCCAGGG AGTTTGCCAG GGCCGGGGCC CACATAACGA TTGTGGATCG CAACGAGGCG
CGGGCCCGCC AGGTGGCCGC CGAGATCGGC GCCCAGGTAC GGGTTGGGGA TGTCAGCGAA
TCGGCCTTCT GCGACCGGGT GGTCGCCGAT ACCCTCGCCC AGCACGGACG GCTCGACGTG
CTGGTCAACG CGGCCGGCAT CATCGTGCGG GCCAGCGGCG AGGAGACCAG CGACGAGCAG
TGGCAACGGG TCATGGCGGT GAACGTGAGC GGCACCTTTT TTATGTGCCG GGCCGCTATC
CGGGCCATGA AGCCCCAGGG CCGCGGGGCC ATCGTCAACT TTGGCTCAAT CTGGGGCGAC
CTGGGGGCAG CAGGGGTGGC GGCCTACTGT GCAAGCAAGG GGGCCGTGCA CAACCTGACC
CGCGCCCTGG CCCTCGAGCA CGCCAAAGAC GGCCTCCGCA TCAACGCGGT CTGCCCCGGC
GAGGTCAACA CCCCCATGCT CCAGTCCGAA CGCAAGGAAC CCGTTACCCC CGAACTGCTG
CAACGCCTGG CTGAGACCGT GCCCATGGGC CGCCTGGCCG ACCCCGCCGA AATCGCCCAG
GTGGTGCTGT TTCTGGCCTC CGACAAGGCC AGCTACATGA CCGGCTCGCT GGTGCTGGTG
GATGCGGGGT ATGCCGCCCG ATGA
 
Protein sequence
MDFQGKAVIV TGGASGMGEA TAREFARAGA HITIVDRNEA RARQVAAEIG AQVRVGDVSE 
SAFCDRVVAD TLAQHGRLDV LVNAAGIIVR ASGEETSDEQ WQRVMAVNVS GTFFMCRAAI
RAMKPQGRGA IVNFGSIWGD LGAAGVAAYC ASKGAVHNLT RALALEHAKD GLRINAVCPG
EVNTPMLQSE RKEPVTPELL QRLAETVPMG RLADPAEIAQ VVLFLASDKA SYMTGSLVLV
DAGYAAR