Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1897 |
Symbol | |
ID | 8880005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 1956745 |
End bp | 1957488 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003507674 |
Protein GI | 291296276 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00100219 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGATTTCC AGGGAAAAGC GGTGATCGTA ACCGGAGGCG CCTCGGGCAT GGGCGAGGCC ACGGCCAGGG AGTTTGCCAG GGCCGGGGCC CACATAACGA TTGTGGATCG CAACGAGGCG CGGGCCCGCC AGGTGGCCGC CGAGATCGGC GCCCAGGTAC GGGTTGGGGA TGTCAGCGAA TCGGCCTTCT GCGACCGGGT GGTCGCCGAT ACCCTCGCCC AGCACGGACG GCTCGACGTG CTGGTCAACG CGGCCGGCAT CATCGTGCGG GCCAGCGGCG AGGAGACCAG CGACGAGCAG TGGCAACGGG TCATGGCGGT GAACGTGAGC GGCACCTTTT TTATGTGCCG GGCCGCTATC CGGGCCATGA AGCCCCAGGG CCGCGGGGCC ATCGTCAACT TTGGCTCAAT CTGGGGCGAC CTGGGGGCAG CAGGGGTGGC GGCCTACTGT GCAAGCAAGG GGGCCGTGCA CAACCTGACC CGCGCCCTGG CCCTCGAGCA CGCCAAAGAC GGCCTCCGCA TCAACGCGGT CTGCCCCGGC GAGGTCAACA CCCCCATGCT CCAGTCCGAA CGCAAGGAAC CCGTTACCCC CGAACTGCTG CAACGCCTGG CTGAGACCGT GCCCATGGGC CGCCTGGCCG ACCCCGCCGA AATCGCCCAG GTGGTGCTGT TTCTGGCCTC CGACAAGGCC AGCTACATGA CCGGCTCGCT GGTGCTGGTG GATGCGGGGT ATGCCGCCCG ATGA
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Protein sequence | MDFQGKAVIV TGGASGMGEA TAREFARAGA HITIVDRNEA RARQVAAEIG AQVRVGDVSE SAFCDRVVAD TLAQHGRLDV LVNAAGIIVR ASGEETSDEQ WQRVMAVNVS GTFFMCRAAI RAMKPQGRGA IVNFGSIWGD LGAAGVAAYC ASKGAVHNLT RALALEHAKD GLRINAVCPG EVNTPMLQSE RKEPVTPELL QRLAETVPMG RLADPAEIAQ VVLFLASDKA SYMTGSLVLV DAGYAAR
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