More than 300 homologs were found in PanDaTox collection
for query gene Veis_0941 on replicon NC_008786
Organism: Verminephrobacter eiseniae EF01-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008786  Veis_0941  short-chain dehydrogenase/reductase SDR  100 
 
 
251 aa  514  1.0000000000000001e-145  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.995863 
 
 
-
 
NC_007953  Bxe_C1363  D-xylose dehydrogenase  59.52 
 
 
268 aa  315  4e-85  Burkholderia xenovorans LB400  Bacteria  normal  0.879722  normal  0.999685 
 
 
-
 
NC_010505  Mrad2831_5401  short-chain dehydrogenase/reductase SDR  63.86 
 
 
258 aa  315  5e-85  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4077  short-chain dehydrogenase/reductase SDR  63.89 
 
 
255 aa  307  9e-83  Ralstonia pickettii 12J  Bacteria  normal  0.13973  normal 
 
 
-
 
NC_012857  Rpic12D_4189  short-chain dehydrogenase/reductase SDR  63.89 
 
 
255 aa  307  9e-83  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4001  short-chain dehydrogenase/reductase SDR  60.32 
 
 
259 aa  296  3e-79  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1729  D-xylose dehydrogenase  58 
 
 
245 aa  283  2.0000000000000002e-75  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.380531  n/a   
 
 
-
 
NC_009484  Acry_2599  short-chain dehydrogenase/reductase SDR  52.38 
 
 
257 aa  252  4.0000000000000004e-66  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0771  GntR family transcriptional regulator  49.4 
 
 
256 aa  243  1.9999999999999999e-63  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00515913  normal  0.0552536 
 
 
-
 
NC_008321  Shewmr4_1984  short-chain dehydrogenase/reductase SDR  45.78 
 
 
256 aa  242  5e-63  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00682949  normal  0.0302653 
 
 
-
 
NC_007912  Sde_0761  putative oxidoreductase  46.8 
 
 
255 aa  241  7.999999999999999e-63  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.429001 
 
 
-
 
NC_011663  Sbal223_2145  short-chain dehydrogenase/reductase SDR  45.38 
 
 
256 aa  241  1e-62  Shewanella baltica OS223  Bacteria  normal  0.0597739  normal  0.690345 
 
 
-
 
NC_009438  Sputcn32_2061  short-chain dehydrogenase/reductase SDR  45.78 
 
 
256 aa  239  2e-62  Shewanella putrefaciens CN-32  Bacteria  normal  0.138185  n/a   
 
 
-
 
NC_008577  Shewana3_2071  short-chain dehydrogenase/reductase SDR  45.38 
 
 
256 aa  239  2.9999999999999997e-62  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00640028  hitchhiker  0.00000248708 
 
 
-
 
NC_010084  Bmul_2761  short-chain dehydrogenase/reductase SDR  51.82 
 
 
264 aa  239  5e-62  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.386853 
 
 
-
 
NC_008322  Shewmr7_1990  short-chain dehydrogenase/reductase SDR  44.98 
 
 
256 aa  236  4e-61  Shewanella sp. MR-7  Bacteria  normal  0.0224708  unclonable  0.0000202886 
 
 
-
 
NC_009654  Mmwyl1_4106  short-chain dehydrogenase/reductase SDR  44.62 
 
 
256 aa  235  6e-61  Marinomonas sp. MWYL1  Bacteria  normal  decreased coverage  0.00000000241543 
 
 
-
 
NC_007908  Rfer_0433  short-chain dehydrogenase/reductase SDR  48.19 
 
 
254 aa  234  1.0000000000000001e-60  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2612  short-chain dehydrogenase/reductase SDR  48.99 
 
 
266 aa  232  4.0000000000000004e-60  Burkholderia phymatum STM815  Bacteria  normal  normal  0.227086 
 
 
-
 
NC_008390  Bamb_0525  short-chain dehydrogenase/reductase SDR  50.6 
 
 
271 aa  232  5e-60  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1263  short chain dehydrogenase/reductase family oxidoreductase  49.8 
 
 
268 aa  231  8.000000000000001e-60  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2483  short chain dehydrogenase/reductase family oxidoreductase  49.8 
 
 
268 aa  231  8.000000000000001e-60  Burkholderia mallei ATCC 23344  Bacteria  normal  0.709099  n/a   
 
 
-
 
NC_007434  BURPS1710b_3480  short chain dehydrogenase/reductase family oxidoreductase  49.8 
 
 
268 aa  231  8.000000000000001e-60  Burkholderia pseudomallei 1710b  Bacteria  normal  0.538943  n/a   
 
 
-
 
NC_007951  Bxe_A0549  putative short-chain dehydrogenase/reductase, FabG-like  48.58 
 
 
266 aa  231  8.000000000000001e-60  Burkholderia xenovorans LB400  Bacteria  normal  0.204322  normal  0.437639 
 
 
-
 
NC_009080  BMA10247_3302  short chain dehydrogenase/reductase family oxidoreductase  49.8 
 
 
268 aa  231  8.000000000000001e-60  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0403  short chain dehydrogenase/reductase family oxidoreductase  49.8 
 
 
268 aa  231  8.000000000000001e-60  Burkholderia mallei SAVP1  Bacteria  normal  0.253369  n/a   
 
 
-
 
NC_009074  BURPS668_3445  NAD dependent epimerase/dehydratase family protein  49.8 
 
 
268 aa  231  8.000000000000001e-60  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3483  NAD dependent epimerase/dehydratase family protein  49.8 
 
 
271 aa  231  9e-60  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1041  short-chain dehydrogenase/reductase SDR  49.2 
 
 
258 aa  231  1e-59  Variovorax paradoxus S110  Bacteria  normal  0.208357  n/a   
 
 
-
 
NC_009654  Mmwyl1_0516  short-chain dehydrogenase/reductase SDR  48.18 
 
 
254 aa  229  3e-59  Marinomonas sp. MWYL1  Bacteria  normal  0.098133  normal 
 
 
-
 
NC_008786  Veis_0735  short-chain dehydrogenase/reductase SDR  50.81 
 
 
270 aa  228  6e-59  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.304096  normal 
 
 
-
 
NC_007802  Jann_2374  short-chain dehydrogenase/reductase SDR  49.19 
 
 
251 aa  228  6e-59  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3408  short-chain dehydrogenase/reductase SDR  47.77 
 
 
266 aa  228  8e-59  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0359384  normal  0.0764099 
 
 
-
 
NC_012791  Vapar_5073  short-chain dehydrogenase/reductase SDR  49.4 
 
 
261 aa  228  8e-59  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3706  Short-chain dehydrogenase/reductase SDR  50.2 
 
 
268 aa  225  6e-58  Burkholderia sp. 383  Bacteria  normal  0.283086  normal  0.654023 
 
 
-
 
NC_010551  BamMC406_0549  short-chain dehydrogenase/reductase SDR  49.8 
 
 
270 aa  224  1e-57  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.00753595  normal  0.67708 
 
 
-
 
NC_007651  BTH_I1182  short chain dehydrogenase/reductase family oxidoreductase  51.01 
 
 
271 aa  222  4e-57  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0141  short-chain dehydrogenase/reductase SDR  50.61 
 
 
271 aa  218  1e-55  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0592  short-chain dehydrogenase/reductase SDR  50.61 
 
 
271 aa  218  1e-55  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0410788 
 
 
-
 
NC_008542  Bcen2424_0624  short-chain dehydrogenase/reductase SDR  50.61 
 
 
271 aa  218  1e-55  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0853252  n/a   
 
 
-
 
NC_008254  Meso_3587  short-chain dehydrogenase/reductase SDR  47.41 
 
 
255 aa  214  7e-55  Chelativorans sp. BNC1  Bacteria  normal  0.435673  n/a   
 
 
-
 
NC_011365  Gdia_0389  short-chain dehydrogenase/reductase SDR  46.61 
 
 
261 aa  209  4e-53  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.132836  normal  0.554145 
 
 
-
 
BN001304  ANIA_07128  conserved hypothetical protein  41.13 
 
 
275 aa  207  1e-52  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00131023  normal  0.0770254 
 
 
-
 
NC_012560  Avin_51440  Short-chain dehydrogenase/reductase (SDR) family protein  45.78 
 
 
260 aa  204  9e-52  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0503  short-chain dehydrogenase/reductase SDR  49 
 
 
253 aa  204  1e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2258  short-chain dehydrogenase/reductase SDR  47.2 
 
 
271 aa  200  9.999999999999999e-51  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0225727  hitchhiker  0.000000282328 
 
 
-
 
NC_012850  Rleg_0546  short-chain dehydrogenase/reductase SDR  47.62 
 
 
257 aa  199  3.9999999999999996e-50  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3834  short-chain dehydrogenase/reductase SDR  39.36 
 
 
256 aa  198  9e-50  Jannaschia sp. CCS1  Bacteria  normal  0.140905  normal 
 
 
-
 
NC_009952  Dshi_1243  short-chain dehydrogenase/reductase SDR  43.15 
 
 
258 aa  194  1e-48  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.455666  normal  0.236793 
 
 
-
 
NC_008043  TM1040_3488  short-chain dehydrogenase/reductase SDR  41.74 
 
 
256 aa  192  3e-48  Ruegeria sp. TM1040  Bacteria  normal  normal  0.742718 
 
 
-
 
NC_009636  Smed_0438  short-chain dehydrogenase/reductase SDR  46.43 
 
 
256 aa  192  3e-48  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.285603 
 
 
-
 
NC_008228  Patl_3529  short-chain dehydrogenase/reductase SDR  40.96 
 
 
270 aa  189  4e-47  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3666  short-chain dehydrogenase/reductase SDR  40.16 
 
 
255 aa  186  4e-46  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00136979  normal 
 
 
-
 
NC_007493  RSP_1369  Short-chain dehydrogenase/reductase SDR  41.94 
 
 
260 aa  177  2e-43  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0037  short-chain dehydrogenase/reductase SDR  41.53 
 
 
260 aa  176  5e-43  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_0027  short-chain dehydrogenase/reductase SDR  43.7 
 
 
288 aa  175  5e-43  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  39.68 
 
 
254 aa  162  4.0000000000000004e-39  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_013595  Sros_1990  short-chain dehydrogenase/reductase SDR  36.59 
 
 
249 aa  146  4.0000000000000006e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2921  dehydrogenase  35.51 
 
 
261 aa  144  1e-33  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.932836 
 
 
-
 
NC_007511  Bcep18194_B1106  short chain dehydrogenase  37.65 
 
 
256 aa  143  2e-33  Burkholderia sp. 383  Bacteria  normal  0.179926  normal  0.355646 
 
 
-
 
NC_010515  Bcenmc03_5592  short chain dehydrogenase  38.46 
 
 
256 aa  142  5e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0383111 
 
 
-
 
NC_008061  Bcen_3659  short chain dehydrogenase  38.46 
 
 
256 aa  142  5e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.821403  n/a   
 
 
-
 
NC_008543  Bcen2424_4708  short chain dehydrogenase  38.46 
 
 
256 aa  142  5e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  0.978516  normal  0.14883 
 
 
-
 
NC_014158  Tpau_3804  short-chain dehydrogenase/reductase SDR  35.95 
 
 
253 aa  142  6e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0268  short-chain dehydrogenase/reductase SDR  35.1 
 
 
250 aa  141  8e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008391  Bamb_4102  short chain dehydrogenase  37.65 
 
 
256 aa  141  9.999999999999999e-33  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.188504 
 
 
-
 
NC_010552  BamMC406_4567  short chain dehydrogenase  37.65 
 
 
256 aa  140  1.9999999999999998e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  0.16205  hitchhiker  0.000267636 
 
 
-
 
NC_010623  Bphy_4234  short chain dehydrogenase  34.84 
 
 
252 aa  140  1.9999999999999998e-32  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3985  short chain dehydrogenase  37.65 
 
 
256 aa  139  3e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.473882  normal  0.0186737 
 
 
-
 
NC_009075  BURPS668_A1308  short chain dehydrogenase  38.87 
 
 
256 aa  140  3e-32  Burkholderia pseudomallei 668  Bacteria  normal  0.480054  n/a   
 
 
-
 
NC_006349  BMAA1335  short chain dehydrogenase  38.87 
 
 
256 aa  139  4.999999999999999e-32  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1235  short chain dehydrogenase  38.87 
 
 
256 aa  139  4.999999999999999e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0318  short chain dehydrogenase  38.87 
 
 
256 aa  139  4.999999999999999e-32  Burkholderia mallei SAVP1  Bacteria  normal  0.594764  n/a   
 
 
-
 
NC_008835  BMA10229_0594  short chain dehydrogenase  38.87 
 
 
256 aa  139  4.999999999999999e-32  Burkholderia mallei NCTC 10229  Bacteria  normal  0.512344  n/a   
 
 
-
 
NC_009079  BMA10247_A0973  short chain dehydrogenase  38.87 
 
 
256 aa  139  4.999999999999999e-32  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2495  short chain dehydrogenase  38.87 
 
 
256 aa  139  6e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1500  short chain dehydrogenase  37.25 
 
 
256 aa  138  7e-32  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1453  short-chain dehydrogenase/reductase SDR  37.08 
 
 
252 aa  138  7e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.950748  normal 
 
 
-
 
NC_013947  Snas_2729  short-chain dehydrogenase/reductase SDR  37.45 
 
 
250 aa  138  7.999999999999999e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.189012  normal  0.165554 
 
 
-
 
NC_011206  Lferr_1879  short-chain dehydrogenase/reductase SDR  34.29 
 
 
261 aa  138  7.999999999999999e-32  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.828765 
 
 
-
 
NC_011761  AFE_2225  glucose 1-dehydrogenase, putative  34.29 
 
 
261 aa  138  7.999999999999999e-32  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3357  short-chain dehydrogenase/reductase SDR  35.25 
 
 
253 aa  138  8.999999999999999e-32  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00078495  n/a   
 
 
-
 
NC_013159  Svir_22780  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  36.21 
 
 
251 aa  137  1e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.503497 
 
 
-
 
NC_007794  Saro_1475  short-chain dehydrogenase/reductase SDR  33.85 
 
 
266 aa  136  2e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.388787  n/a   
 
 
-
 
NC_008781  Pnap_1241  short-chain dehydrogenase/reductase SDR  34.14 
 
 
260 aa  137  2e-31  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0407787  normal  0.415093 
 
 
-
 
NC_008740  Maqu_1429  short-chain dehydrogenase/reductase SDR  33.2 
 
 
256 aa  137  2e-31  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  34.41 
 
 
258 aa  136  3.0000000000000003e-31  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_010676  Bphyt_7060  short chain dehydrogenase  36.03 
 
 
255 aa  136  3.0000000000000003e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.556367 
 
 
-
 
NC_009667  Oant_2067  short-chain dehydrogenase/reductase SDR  35.8 
 
 
246 aa  135  6.0000000000000005e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3011  short-chain dehydrogenase/reductase SDR  37.55 
 
 
251 aa  135  7.000000000000001e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1897  short-chain dehydrogenase/reductase SDR  35.8 
 
 
247 aa  135  9e-31  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.00100219 
 
 
-
 
NC_011989  Avi_3319  d-beta-hydroxybutyrate dehydrogenase  35.06 
 
 
256 aa  135  9e-31  Agrobacterium vitis S4  Bacteria  normal  0.0697406  n/a   
 
 
-
 
NC_011761  AFE_1857  glucose 1-dehydrogenase, putative  33.88 
 
 
261 aa  134  9.999999999999999e-31  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.637675  n/a   
 
 
-
 
NC_011206  Lferr_1535  short-chain dehydrogenase/reductase SDR  33.88 
 
 
261 aa  134  9.999999999999999e-31  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0579067  normal  0.028281 
 
 
-
 
NC_003295  RSc2351  3-ketoacyl-(acyl-carrier-protein) reductase  36.03 
 
 
252 aa  134  1.9999999999999998e-30  Ralstonia solanacearum GMI1000  Bacteria  normal  0.647461  normal 
 
 
-
 
NC_010335  Caul_5136  short-chain dehydrogenase/reductase SDR  34.15 
 
 
254 aa  134  1.9999999999999998e-30  Caulobacter sp. K31  Bacteria  normal  0.708802  normal 
 
 
-
 
NC_011004  Rpal_4152  short-chain dehydrogenase/reductase SDR  38.25 
 
 
257 aa  134  1.9999999999999998e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1080  short chain dehydrogenase/reductase family oxidoreductase  35.54 
 
 
246 aa  133  1.9999999999999998e-30  Brucella ovis ATCC 25840  Bacteria  normal  0.38691  n/a   
 
 
-
 
NC_008228  Patl_2140  short-chain dehydrogenase/reductase SDR  31.17 
 
 
254 aa  134  1.9999999999999998e-30  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3704  short-chain dehydrogenase/reductase SDR  32.39 
 
 
257 aa  134  1.9999999999999998e-30  Chelativorans sp. BNC1  Bacteria  normal  0.416119  n/a   
 
 
-
 
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