| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1879 |
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| Symbol | |
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| ID | 6877864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1864163 |
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| End bp | 1864948 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642789749 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002220307 |
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| Protein GI | 198283986 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.828765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAATC TGGACTTGCA GGGCCGGCGG GCGCTGGTCA CGGGTGGAAG TGGCGGCCTC
GGACGCGCCA TTGCCGAGAC GCTGGCCACT GCCGGGGCAC AGGTGGCCGT CCATTACCGG
AAAGGTCTGG ACGAAGCCGA GGCAGTGGTC GCGGCCATCC AGAAGCGGGG CGGCACGGCT
CAAGCTTTTC AGGCCGATGT GGCTGATCCT GCGGCCGTAG AGAGGCTGCT GCAGGAGATC
GAATCCGCCT TCGGCGGCCT GGACATTCTC GTCAACAATG CCGGCATGGA TGGCCCGCGC
GCCAGCGTCG GCGATGATGA TCCTCAGGTA TGGGAAAAAG TCCTCGCCGT CGATCTCATG
GGCCCCTACT ACTGCGCCCG TGCCGCCATC CCACGCATGG AGAAGGCCAA ACGCGGGGTG
ATCATCAATA TCACCTCCGT GCATGAGTTT ATTCCCTGGG AAGGCTACAG CGCGTATACC
AGCGCCAAGG CAGGTCTGTC CATGTTCACC AAGACCCTCG CCCAGGAAAC GGCGGATAAA
GGTATCCGGG TCGTGGCCAT TGCCCCCGGT GCCATCCAGA CACCCATCAA TCAGTCGGTC
TGGAGCGACC CGCAGTCCCT CAAAGACCTG AATGAGAAAA TCTCCATGGG TCGTCTCGGC
AACCCCGAGG AGATTGGCAA TGTGGCGGCT TTTCTCGCCA GTGATCTGGC CAGTTACATC
ACCGGCACCA CCCTTGCGGT GGATGGCGGG ATGTTGATTT ACCCCGAGTT CCGCCACGGC
GGCTGA
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| Protein sequence | MINLDLQGRR ALVTGGSGGL GRAIAETLAT AGAQVAVHYR KGLDEAEAVV AAIQKRGGTA
QAFQADVADP AAVERLLQEI ESAFGGLDIL VNNAGMDGPR ASVGDDDPQV WEKVLAVDLM
GPYYCARAAI PRMEKAKRGV IINITSVHEF IPWEGYSAYT SAKAGLSMFT KTLAQETADK
GIRVVAIAPG AIQTPINQSV WSDPQSLKDL NEKISMGRLG NPEEIGNVAA FLASDLASYI
TGTTLAVDGG MLIYPEFRHG G
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